RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
PHGDH-228ENST00000641847 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-228ENST00000641847 PARP10Q53GL7 1025 aa11.77□□□□□ -0.53
PHGDH-228ENST00000641847 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
PHGDH-228ENST00000641847 CHMP4BQ9H444 224 aaKnown RBP11.77□□□□□ -0.53
PHGDH-228ENST00000641847 CWC25Q9NXE8 425 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-228ENST00000641847 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
PHGDH-228ENST00000641847 GRM8O00222 908 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 FKBP1BP68106 108 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 GCKRQ14397 625 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
PHGDH-228ENST00000641847 SUSD4Q5VX71 490 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
PHGDH-228ENST00000641847 TMC4Q7Z404 712 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 ZNF34Q8IZ26 560 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 ZNF296Q8WUU4 475 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-228ENST00000641847 UBN2Q6ZU65 1347 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 LAMB2P55268 1798 aa11.76□□□□□ -0.53
PHGDH-228ENST00000641847 ADM5C9JUS6 153 aa11.75□□□□□ -0.53
PHGDH-228ENST00000641847 GNAI3P08754 354 aa11.75□□□□□ -0.53
PHGDH-228ENST00000641847 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-228ENST00000641847 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
PHGDH-228ENST00000641847 NLRP10Q86W26 655 aa11.75□□□□□ -0.53
PHGDH-228ENST00000641847 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
PHGDH-228ENST00000641847 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
PHGDH-228ENST00000641847 ZBTB40Q9NUA8 1239 aa11.75□□□□□ -0.53
PHGDH-228ENST00000641847 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-228ENST00000641847 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-228ENST00000641847 NTSR2O95665 410 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 AAMPQ13685 434 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 WASHC4Q2M389 1173 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
PHGDH-228ENST00000641847 DLK2Q6UY11 383 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 UTYO14607 1347 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 AKAP11Q9UKA4 1901 aa11.74□□□□□ -0.53
PHGDH-228ENST00000641847 HTTP42858 3142 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 GPR25O00155 361 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 PSMD14O00487 310 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 GNAI2P04899 355 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-228ENST00000641847 SREBF2Q12772 1141 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 SLC10A5Q5PT55 438 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 UBE3BQ7Z3V4 1068 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 RASAL3Q86YV0 1011 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 PIAS4Q8N2W9 510 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-228ENST00000641847 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-228ENST00000641847 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
PHGDH-228ENST00000641847 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 YDJCA8MPS7 323 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 G3V3G9 751 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 FKTNO75072 461 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 PCCAP05165 728 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 FXR1P51114 621 aaKnown RBP eCLIP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 GRAPQ13588 217 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 ZBTB38Q8NAP3 1195 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 GRAPLQ8TC17 118 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 EYA3Q99504 573 aa11.72□□□□□ -0.53
PHGDH-228ENST00000641847 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 LRRFIP2Q9Y608 721 aaKnown RBP11.72□□□□□ -0.53
PHGDH-228ENST00000641847 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 H7C1W4 665 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 CASP7P55210 303 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-228ENST00000641847 SLC51AQ86UW1 340 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 PPP4R2Q9NY27 417 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.53
PHGDH-228ENST00000641847 BRCA2P51587 3418 aa11.71□□□□□ -0.54
PHGDH-228ENST00000641847 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
PHGDH-228ENST00000641847 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
PHGDH-228ENST00000641847 TM4SF4P48230 202 aa11.7□□□□□ -0.54
PHGDH-228ENST00000641847 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-228ENST00000641847 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
PHGDH-228ENST00000641847 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
PHGDH-228ENST00000641847 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
PHGDH-228ENST00000641847 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
PHGDH-228ENST00000641847 HDAC5Q9UQL6 1122 aa11.7□□□□□ -0.54
PHGDH-228ENST00000641847 MYH3P11055 1940 aa11.7□□□□□ -0.54
PHGDH-228ENST00000641847 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
PHGDH-228ENST00000641847 ALDH1A1P00352 501 aa11.69□□□□□ -0.54
PHGDH-228ENST00000641847 EGFRP00533 1210 aa11.69□□□□□ -0.54
PHGDH-228ENST00000641847 NF2P35240 595 aa11.69□□□□□ -0.54
PHGDH-228ENST00000641847 KAZALD1Q96I82 304 aa11.69□□□□□ -0.54
PHGDH-228ENST00000641847 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
PHGDH-228ENST00000641847 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-228ENST00000641847 ECE2O60344 883 aa11.68□□□□□ -0.54
PHGDH-228ENST00000641847 SCARF1Q14162 830 aa11.68□□□□□ -0.54
PHGDH-228ENST00000641847 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
PHGDH-228ENST00000641847 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
PHGDH-228ENST00000641847 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms