RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
PHGDH-221ENST00000641573 LBX1P52954 281 aa15.96■□□□□ 0.15
PHGDH-221ENST00000641573 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
PHGDH-221ENST00000641573 NEUROD6Q96NK8 337 aa15.96■□□□□ 0.15
PHGDH-221ENST00000641573 AKAP2Q9Y2D5 859 aa15.96■□□□□ 0.15
PHGDH-221ENST00000641573 A0A1B0GUL7 405 aa15.95■□□□□ 0.14
PHGDH-221ENST00000641573 IQCA1LA6NCM1 817 aa15.95■□□□□ 0.14
PHGDH-221ENST00000641573 IGHMBP2P38935 993 aaKnown RBP15.95■□□□□ 0.14
PHGDH-221ENST00000641573 TIMM10P62072 90 aa15.95■□□□□ 0.14
PHGDH-221ENST00000641573 CCDC24Q8N4L8 307 aa15.95■□□□□ 0.14
PHGDH-221ENST00000641573 ABHD8Q96I13 439 aa15.95■□□□□ 0.14
PHGDH-221ENST00000641573 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
PHGDH-221ENST00000641573 NPHP1O15259 732 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 ATP5JP18859 108 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 VEGFBP49765 207 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 CNBD1Q8NA66 436 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.142e-6■■■□□ 15.2
PHGDH-221ENST00000641573 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
PHGDH-221ENST00000641573 MPHOSPH8Q99549 860 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 BOLA2Q9H3K6 86 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-221ENST00000641573 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
PHGDH-221ENST00000641573 TMEM88BA6NKF7 163 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 C21orf2O43822 256 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 DDNO94850 711 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-221ENST00000641573 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 CHMLP26374 656 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 LDHDQ86WU2 507 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 VGLL2Q8N8G2 317 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 TBC1D32Q96NH3 1257 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 TAOK3Q9H2K8 898 aa15.93■□□□□ 0.14
PHGDH-221ENST00000641573 ATP2B3Q16720 1220 aa15.92■□□□□ 0.14
PHGDH-221ENST00000641573 PRR5LQ6MZQ0 368 aa15.92■□□□□ 0.14
PHGDH-221ENST00000641573 EVI5LQ96CN4 794 aa15.92■□□□□ 0.14
PHGDH-221ENST00000641573 C22orf23Q9BZE7 217 aa15.92■□□□□ 0.14
PHGDH-221ENST00000641573 WBP1LQ9NX94 342 aa15.92■□□□□ 0.14
PHGDH-221ENST00000641573 PASKQ96RG2 1323 aa15.92■□□□□ 0.14
PHGDH-221ENST00000641573 PDE8BO95263 885 aa15.91■□□□□ 0.14
PHGDH-221ENST00000641573 ADORA1P30542 326 aa15.91■□□□□ 0.14
PHGDH-221ENST00000641573 PDE6BP35913 854 aa15.91■□□□□ 0.14
PHGDH-221ENST00000641573 MLLT1Q03111 559 aaPredicted RBP15.91■□□□□ 0.14
PHGDH-221ENST00000641573 ANKRD18AQ8IVF6 992 aa15.91■□□□□ 0.14
PHGDH-221ENST00000641573 XAGE2Q96GT9 111 aa15.91■□□□□ 0.14
PHGDH-221ENST00000641573 DICER1Q9UPY3 1922 aaKnown RBP15.91■□□□□ 0.14
PHGDH-221ENST00000641573 ST5P78524 1137 aa15.9■□□□□ 0.14
PHGDH-221ENST00000641573 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
PHGDH-221ENST00000641573 HELBQ8NG08 1087 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-221ENST00000641573 HAUS7Q99871 368 aa15.9■□□□□ 0.14
PHGDH-221ENST00000641573 ESYT1Q9BSJ8 1104 aa15.9■□□□□ 0.14
PHGDH-221ENST00000641573 ANKRD31Q8N7Z5 1873 aa15.9■□□□□ 0.14
PHGDH-221ENST00000641573 LTBP3Q9NS15 1303 aa15.9■□□□□ 0.14
PHGDH-221ENST00000641573 COL4A1P02462 1669 aa15.89■□□□□ 0.13
PHGDH-221ENST00000641573 MAP2K1Q02750 393 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-221ENST00000641573 PUM3Q15397 648 aaKnown RBP15.89■□□□□ 0.13
PHGDH-221ENST00000641573 CCDC158Q5M9N0 1113 aa15.89■□□□□ 0.13
PHGDH-221ENST00000641573 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
PHGDH-221ENST00000641573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.89■□□□□ 0.13
PHGDH-221ENST00000641573 CELF1Q92879 486 aaKnown RBP15.89■□□□□ 0.13
PHGDH-221ENST00000641573 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 HSPA8P11142 646 aaKnown RBP15.88■□□□□ 0.13
PHGDH-221ENST00000641573 FGFR2P21802 821 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 RPS8P62241 208 aaKnown RBP15.88■□□□□ 0.13
PHGDH-221ENST00000641573 CHRNDQ07001 517 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 EAPPQ56P03 285 aaPredicted RBP15.88■□□□□ 0.13
PHGDH-221ENST00000641573 TTC39AQ5SRH9 613 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 SOGA3Q5TF21 947 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 LPIN2Q92539 896 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
PHGDH-221ENST00000641573 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
PHGDH-221ENST00000641573 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 FER1L6Q2WGJ9 1857 aa15.88■□□□□ 0.13
PHGDH-221ENST00000641573 TAF5LO75529 589 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 REC8O95072 547 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 IFIT1P09914 478 aaKnown RBP15.87■□□□□ 0.13
PHGDH-221ENST00000641573 SLC5A1P13866 664 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 RBM25P49756 843 aaKnown RBP15.87■□□□□ 0.13
PHGDH-221ENST00000641573 DEFB115Q30KQ5 88 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 EDC3Q96F86 508 aaKnown RBP15.87■□□□□ 0.13
PHGDH-221ENST00000641573 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 FSD1Q9BTV5 496 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 TAF1DQ9H5J8 278 aaPredicted RBP15.87■□□□□ 0.13
PHGDH-221ENST00000641573 DIAPH3Q9NSV4 1193 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
PHGDH-221ENST00000641573 AK9Q5TCS8 1911 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 HIP1O00291 1037 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-221ENST00000641573 IPO9Q96P70 1041 aaKnown RBP15.86■□□□□ 0.13
PHGDH-221ENST00000641573 BEGAINQ9BUH8 593 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 USP26Q9BXU7 913 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 MINPP1Q9UNW1 487 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 NDUFB9Q9Y6M9 179 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 SCN4AP35499 1836 aa15.86■□□□□ 0.13
PHGDH-221ENST00000641573 KLRG2A4D1S0 409 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-221ENST00000641573 RASSF10A6NK89 507 aa15.85■□□□□ 0.13
PHGDH-221ENST00000641573 ITGBL1O95965 494 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-221ENST00000641573 RUFY2Q8WXA3 655 aa15.85■□□□□ 0.13
PHGDH-221ENST00000641573 ABT1Q9ULW3 272 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms