RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TSPY26PQ9H489 355 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 MYH14Q7Z406 1995 aaKnown RBP20.23■□□□□ 0.83
PHGDH-211ENST00000641213 RREB1Q92766 1687 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 E7EWF7 191 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 ADAMTS2O95450 1211 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 ZFYP08048 801 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-211ENST00000641213 EXOSC10Q01780 885 aaKnown RBP20.23■□□□□ 0.83
PHGDH-211ENST00000641213 CCDC183Q5T5S1 534 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 CNNM1Q9NRU3 951 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 ESPNB1AK53 854 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 DDB1Q16531 1140 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 FERMT3Q86UX7 667 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 THRAP3Q9Y2W1 955 aaKnown RBP20.22■□□□□ 0.83
PHGDH-211ENST00000641213 JAK2O60674 1132 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 TPRNQ4KMQ1 711 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 PI16Q6UXB8 463 aa20.22■□□□□ 0.83
PHGDH-211ENST00000641213 LRP5O75197 1615 aa20.21■□□□□ 0.83
PHGDH-211ENST00000641213 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
PHGDH-211ENST00000641213 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
PHGDH-211ENST00000641213 FGD1P98174 961 aa20.21■□□□□ 0.83
PHGDH-211ENST00000641213 WASHC4Q2M389 1173 aa20.21■□□□□ 0.83
PHGDH-211ENST00000641213 AGXT2Q9BYV1 514 aa20.21■□□□□ 0.83
PHGDH-211ENST00000641213 CICQ96RK0 1608 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-211ENST00000641213 PFKFB2O60825 505 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 CLCN1P35523 988 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
PHGDH-211ENST00000641213 PDLIM2Q96JY6 352 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
PHGDH-211ENST00000641213 FOXP2O15409 715 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 MCAMP43121 646 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 KRT85P78386 507 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 SCRN1Q12765 414 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 TTLL5Q6EMB2 1281 aa20.2■□□□□ 0.82
PHGDH-211ENST00000641213 FAM173BQ6P4H8 233 aa20.19■□□□□ 0.82
PHGDH-211ENST00000641213 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
PHGDH-211ENST00000641213 APPBP2Q92624 585 aa20.19■□□□□ 0.82
PHGDH-211ENST00000641213 ZNF512BQ96KM6 892 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-211ENST00000641213 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
PHGDH-211ENST00000641213 LETM1O95202 739 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-211ENST00000641213 PDE8BO95263 885 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 APOBRQ0VD83 1088 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 MARCH10Q8NA82 808 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-211ENST00000641213 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 ATP6V1AP38606 617 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 TTC6Q86TZ1 520 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 SMARCC2Q8TAQ2 1214 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 LLPHQ9BRT6 129 aaKnown RBP20.18■□□□□ 0.82
PHGDH-211ENST00000641213 PUS7LQ9H0K6 701 aaKnown RBP20.18■□□□□ 0.82
PHGDH-211ENST00000641213 CTNNA3Q9UI47 895 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 LAMB2P55268 1798 aa20.18■□□□□ 0.82
PHGDH-211ENST00000641213 A0A0G2JS52 829 aa20.17■□□□□ 0.82
PHGDH-211ENST00000641213 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
PHGDH-211ENST00000641213 AK7Q96M32 723 aa20.17■□□□□ 0.82
PHGDH-211ENST00000641213 ELP1O95163 1332 aa20.17■□□□□ 0.82
PHGDH-211ENST00000641213 SUSD4Q5VX71 490 aa20.16■□□□□ 0.82
PHGDH-211ENST00000641213 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
PHGDH-211ENST00000641213 SPATA31A5Q5VU36 1347 aa20.16■□□□□ 0.82
PHGDH-211ENST00000641213 SPATA31A7Q8IWB4 1347 aa20.16■□□□□ 0.82
PHGDH-211ENST00000641213 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-211ENST00000641213 LOC102724428A0A0B4J2F2 783 aa20.15■□□□□ 0.82
PHGDH-211ENST00000641213 FGAP02671 866 aa20.15■□□□□ 0.82
PHGDH-211ENST00000641213 SIK1P57059 783 aa20.15■□□□□ 0.82
PHGDH-211ENST00000641213 NSUN7Q8NE18 718 aaKnown RBP20.15■□□□□ 0.82
PHGDH-211ENST00000641213 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.821e-14■□□□□ 11
PHGDH-211ENST00000641213 DOCK2Q92608 1830 aa20.15■□□□□ 0.82
PHGDH-211ENST00000641213 CTDNEP1O95476 244 aa20.15■□□□□ 0.82
PHGDH-211ENST00000641213 IMMTQ16891 758 aaKnown RBP20.15■□□□□ 0.82
PHGDH-211ENST00000641213 CHST3Q7LGC8 479 aa20.15■□□□□ 0.82
PHGDH-211ENST00000641213 GPAA1O43292 621 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-211ENST00000641213 ITPK1Q13572 414 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 TTF1Q15361 905 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-211ENST00000641213 FBXL16Q8N461 479 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 SCAND2PQ9GZW5 306 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-211ENST00000641213 MROH5Q6ZUA9 1318 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 ARID4AP29374 1257 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-211ENST00000641213 ADD2P35612 726 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 PHKA1P46020 1223 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 HAND2P61296 217 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 RESTQ13127 1097 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 CCDC102BQ68D86 513 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 ZSCAN25Q6NSZ9 544 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 FAM184AQ8NB25 1140 aa20.14■□□□□ 0.81
PHGDH-211ENST00000641213 ZNF274Q96GC6 653 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-211ENST00000641213 ATRNO75882 1429 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 CASZ1Q86V15 1759 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 H3BQV1 296 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 FGFR2P21802 821 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 PDIA3P30101 505 aaKnown RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 PUM3Q15397 648 aaKnown RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 HS1BP3Q53T59 392 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 IFFO2Q5TF58 517 aa20.13■□□□□ 0.81
PHGDH-211ENST00000641213 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 KLHL34Q8N239 644 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms