RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	FCHSD1	Q86WN1	690 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	BHMT	Q93088	406 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	PZP	P20742	1482 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	TCOF1	Q13428	1488 aa	Known RBP	10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	ABCC3	O15438	1527 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	MAST1	Q9Y2H9	1570 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	CROCC2	H7BZ55	1655 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	TNFRSF10B	O14763	440 aa		10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	AMPD1	P23109	780 aa		10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	ARSD	P51689	593 aa		10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	FAM26D	Q5JW98	314 aa		10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	ETFBKMT	Q8IXQ9	262 aa		10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	RETREG2	Q8NC44	543 aa		10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	AVEN	Q9NQS1	362 aa	Predicted RBP	10.21	□□□□□ -0.77
PAX6-267	ENST00000640251	RNF17	Q9BXT8	1623 aa	Known RBP	10.21	□□□□□ -0.78
PAX6-267	ENST00000640251	OPLAH	O14841	1288 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	EPX	P11678	715 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	EPB42	P16452	691 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	GRN	P28799	593 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	MAP3K1	Q13233	1512 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	NEUROD1	Q13562	356 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	RRAGC	Q9HB90	399 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	LRRC4B	Q9NT99	713 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	UST	Q9Y2C2	406 aa		10.2	□□□□□ -0.78
PAX6-267	ENST00000640251	POLR1A	O95602	1720 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	PHLDB3	Q6NSJ2	640 aa		10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	ILDR2	Q71H61	639 aa		10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	RGL4	Q8IZJ4	473 aa		10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	CMTR1	Q8N1G2	835 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	PNMA5	Q96PV4	448 aa		10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	IGFLR1	Q9H665	355 aa		10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	STRCP1	A6NGW2	1772 aa		10.19	□□□□□ -0.78
PAX6-267	ENST00000640251	PLA2R1	Q13018	1463 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	DAPK1	P53355	1430 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	FGD6	Q6ZV73	1430 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	MIA2	Q96PC5	1412 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	TBC1D8B	Q0IIM8	1120 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	CCIN	Q13939	588 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	KRT25	Q7Z3Z0	450 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	GSX2	Q9BZM3	304 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	STIM2	Q9P246	746 aa		10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	RTCB	Q9Y3I0	505 aa	Known RBP	10.18	□□□□□ -0.78
PAX6-267	ENST00000640251	KIF15	Q9NS87	1388 aa		10.17	□□□□□ -0.78
PAX6-267	ENST00000640251	CNTNAP5	Q8WYK1	1306 aa		10.17	□□□□□ -0.78
PAX6-267	ENST00000640251	SIN3B	O75182	1162 aa		10.17	□□□□□ -0.78
PAX6-267	ENST00000640251	BTBD6	Q96KE9	485 aa		10.17	□□□□□ -0.78
PAX6-267	ENST00000640251	ERVK-7	P63135	1459 aa		10.17	□□□□□ -0.78
PAX6-267	ENST00000640251	UBAP1L	F5GYI3	381 aa		10.16	□□□□□ -0.78
PAX6-267	ENST00000640251	ZBTB39	O15060	712 aa		10.16	□□□□□ -0.78
PAX6-267	ENST00000640251	FAM50A	Q14320	339 aa	Known RBP	10.16	□□□□□ -0.78
PAX6-267	ENST00000640251	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.16	□□□□□ -0.78
PAX6-267	ENST00000640251	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.16	□□□□□ -0.78
PAX6-267	ENST00000640251	UGGT1	Q9NYU2	1555 aa		10.16	□□□□□ -0.78
PAX6-267	ENST00000640251	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	SPATA31D1	Q6ZQQ2	1576 aa		10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	NFKB1	P19838	968 aa		10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	SNRPN	P63162	240 aa	Known RBP	10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	ELOA3B	Q3SY89	546 aa		10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	ELOA3	Q8NG57	546 aa		10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	CCER1	Q8TC90	406 aa	Predicted RBP	10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	DUOX2	Q9NRD8	1548 aa		10.15	□□□□□ -0.78
PAX6-267	ENST00000640251	DISP3	Q9P2K9	1392 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	VWDE	Q8N2E2	1590 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	UBR1	Q8IWV7	1749 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	SASH3	O75995	380 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	ALAS2	P22557	587 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	TARS	P26639	723 aa	Known RBP	10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	LTK	P29376	864 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	PIP4K2B	P78356	416 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	MTMR3	Q13615	1198 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	CHSY3	Q70JA7	882 aa		10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	SCARF2	Q96GP6	870 aa	Predicted RBP	10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	UBE2O	Q9C0C9	1292 aa	Known RBP	10.14	□□□□□ -0.79
PAX6-267	ENST00000640251	ZC3H13	Q5T200	1668 aa	Known RBP	10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	IRS1	P35568	1242 aa		10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	ZAP70	P43403	619 aa		10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	PODN	Q7Z5L7	613 aa		10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	BEND7	Q8N7W2	519 aa	Predicted RBP	10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	HELQ	Q8TDG4	1101 aa		10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	ALK	Q9UM73	1620 aa		10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	NPHP4	O75161	1426 aa	Predicted RBP	10.13	□□□□□ -0.79
PAX6-267	ENST00000640251	SHANK2	Q9UPX8	1470 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	PIK3C2B	O00750	1634 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	XYLB	O75191	536 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ABL1	P00519	1130 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ITGAE	P38570	1179 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ADH7	P40394	386 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ANKLE2	Q86XL3	938 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ABTB2	Q8N961	1025 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	GPR152	Q8TDT2	470 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	TNFRSF25	Q93038	417 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ANO2	Q9NQ90	1003 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	ZFAT	Q9P243	1243 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	PRDM15	P57071	1507 aa	Predicted RBP	10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	IQGAP1	P46940	1657 aa		10.12	□□□□□ -0.79
PAX6-267	ENST00000640251	DEPDC5	O75140	1603 aa		10.11	□□□□□ -0.79
PAX6-267	ENST00000640251	NLRP1	Q9C000	1473 aa		10.11	□□□□□ -0.79
PAX6-267	ENST00000640251	RARA	P10276	462 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms