RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.4
NECAP1-216ENST00000639167 LAMA4Q16363 1823 aa12.52□□□□□ -0.41
NECAP1-216ENST00000639167 AP5Z1O43299 807 aa12.52□□□□□ -0.41
NECAP1-216ENST00000639167 KDM4AO75164 1064 aa12.52□□□□□ -0.41
NECAP1-216ENST00000639167 CTDNEP1O95476 244 aa12.52□□□□□ -0.41
NECAP1-216ENST00000639167 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
NECAP1-216ENST00000639167 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
NECAP1-216ENST00000639167 CEBPZQ03701 1054 aaKnown RBP12.52□□□□□ -0.41
NECAP1-216ENST00000639167 HLFQ16534 295 aa12.52□□□□□ -0.41
NECAP1-216ENST00000639167 PI16Q6UXB8 463 aa12.52□□□□□ -0.41
NECAP1-216ENST00000639167 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
NECAP1-216ENST00000639167 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 MCM5P33992 734 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 ZAP70P43403 619 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 HAND2P61296 217 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
NECAP1-216ENST00000639167 NSUN7Q8NE18 718 aaKnown RBP12.51□□□□□ -0.41
NECAP1-216ENST00000639167 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 BICD2Q8TD16 824 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
NECAP1-216ENST00000639167 IFIT5Q13325 482 aaKnown RBP12.5□□□□□ -0.41
NECAP1-216ENST00000639167 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-216ENST00000639167 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
NECAP1-216ENST00000639167 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-216ENST00000639167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.5□□□□□ -0.41
NECAP1-216ENST00000639167 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
NECAP1-216ENST00000639167 TTC12Q9H892 705 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-216ENST00000639167 AKAP2Q9Y2D5 859 aa12.5□□□□□ -0.41
NECAP1-216ENST00000639167 FOXP2O15409 715 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 NR1I2O75469 434 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 STARD3NLO95772 234 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 GUCY1B3Q02153 619 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 TYRO3Q06418 890 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 TRIM28Q13263 835 aaKnown RBP12.49□□□□□ -0.41
NECAP1-216ENST00000639167 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
NECAP1-216ENST00000639167 MRVI1Q9Y6F6 885 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 MAP3K15Q6ZN16 1313 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 CSF1RP07333 972 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 TPM2P07951 284 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 PDIA3P30101 505 aaKnown RBP12.49□□□□□ -0.41
NECAP1-216ENST00000639167 METTL24Q5JXM2 366 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
NECAP1-216ENST00000639167 LLPHQ9BRT6 129 aaKnown RBP12.49□□□□□ -0.41
NECAP1-216ENST00000639167 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-216ENST00000639167 AGXT2Q9BYV1 514 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 GREM2Q9H772 168 aa12.49□□□□□ -0.41
NECAP1-216ENST00000639167 ITGA6P23229 1130 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 KIAA2012Q0VF49 1180 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 NLRP10Q86W26 655 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-216ENST00000639167 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
NECAP1-216ENST00000639167 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-216ENST00000639167 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
NECAP1-216ENST00000639167 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 C17orf53Q8N3J3 647 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-216ENST00000639167 FAM200AQ8TCP9 573 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 CLSTN2Q9H4D0 955 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 DDX19AQ9NUU7 478 aaKnown RBP12.47□□□□□ -0.41
NECAP1-216ENST00000639167 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-216ENST00000639167 FGAP02671 866 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 HMGN5P82970 282 aaKnown RBP12.47□□□□□ -0.41
NECAP1-216ENST00000639167 SPC24Q8NBT2 197 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 CNNM1Q9NRU3 951 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 RIC1Q4ADV7 1423 aa12.47□□□□□ -0.41
NECAP1-216ENST00000639167 STRCQ7RTU9 1775 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 CDK11BP21127 795 aaKnown RBP12.46□□□□□ -0.41
NECAP1-216ENST00000639167 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.41
NECAP1-216ENST00000639167 MCAMP43121 646 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
NECAP1-216ENST00000639167 ANO6Q4KMQ2 910 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 NAA16Q6N069 864 aaPredicted RBP12.46□□□□□ -0.41
NECAP1-216ENST00000639167 TICAM2Q86XR7 235 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 APPBP2Q92624 585 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 CFAP45Q9UL16 551 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.41
NECAP1-216ENST00000639167 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
NECAP1-216ENST00000639167 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.42
NECAP1-216ENST00000639167 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.42
NECAP1-216ENST00000639167 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.42
NECAP1-216ENST00000639167 CTSWP56202 376 aa12.46□□□□□ -0.42
NECAP1-216ENST00000639167 IMMTQ16891 758 aaKnown RBP12.46□□□□□ -0.42
NECAP1-216ENST00000639167 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.42
NECAP1-216ENST00000639167 USP28Q96RU2 1077 aa12.46□□□□□ -0.42
NECAP1-216ENST00000639167 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.42
NECAP1-216ENST00000639167 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.42
NECAP1-216ENST00000639167 TBC1D2BQ9UPU7 963 aa12.46□□□□□ -0.42
NECAP1-216ENST00000639167 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.42
NECAP1-216ENST00000639167 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms