RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 LIMCH1Q9UPQ0 1083 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 RFX7Q2KHR2 1363 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 CASP7P55210 303 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 AKAP17AQ02040 695 aaKnown RBP8.2□□□□□ -1.1
RTTN-211ENST00000638251 APPBP2Q92624 585 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 KAZALD1Q96I82 304 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 EYA3Q99504 573 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 UPF3BQ9BZI7 483 aaKnown RBP8.2□□□□□ -1.1
RTTN-211ENST00000638251 RNF41Q9H4P4 317 aaPredicted RBP8.2□□□□□ -1.1
RTTN-211ENST00000638251 BSDC1Q9NW68 430 aaPredicted RBP8.2□□□□□ -1.1
RTTN-211ENST00000638251 ATRNO75882 1429 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 CREB3L3Q68CJ9 461 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 KLHL34Q8N239 644 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 NEK1Q96PY6 1258 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 NTSR2O95665 410 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 CCDC102BQ68D86 513 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 GGA1Q9UJY5 639 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 BAG3O95817 575 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 CYP7A1P22680 504 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 ZAP70P43403 619 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 ATG9AQ7Z3C6 839 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 SYAP1Q96A49 352 aaPredicted RBP8.19□□□□□ -1.1
RTTN-211ENST00000638251 FAM227BQ96M60 508 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 NSFL1CQ9UNZ2 370 aaKnown RBP8.19□□□□□ -1.1
RTTN-211ENST00000638251 SEMA3EO15041 775 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 HSPA4P34932 840 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 NAA16Q6N069 864 aaPredicted RBP8.19□□□□□ -1.1
RTTN-211ENST00000638251 ABCC12Q96J65 1359 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 POLD1P28340 1107 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 SYNE4Q8N205 404 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 MAGEB6Q8N7X4 407 aa8.19□□□□□ -1.1
RTTN-211ENST00000638251 H0YIN7 160 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 ADORA1P30542 326 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 TRIM29Q14134 588 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 SF3B3Q15393 1217 aaKnown RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 CCDC24Q8N4L8 307 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 CRNKL1Q9BZJ0 848 aaKnown RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 LEMD3Q9Y2U8 911 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 UBN2Q6ZU65 1347 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 RRP12Q5JTH9 1297 aaKnown RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 DSCC1Q9BVC3 393 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 ZNF287Q9HBT7 754 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 BBOX1O75936 387 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 UFL1O94874 794 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 USP5P45974 858 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 GRAPQ13588 217 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 NCOA7Q8NI08 942 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 FBXO41Q8TF61 875 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 WDR33Q9C0J8 1336 aaKnown RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 CCDC69A6NI79 296 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 FOXD4L4Q8WXT5 416 aaPredicted RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 IQSEC3Q9UPP2 1182 aaPredicted RBP8.18□□□□□ -1.1
RTTN-211ENST00000638251 RIPOR2Q9Y4F9 1068 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 LAMB4A4D0S4 1761 aa8.18□□□□□ -1.1
RTTN-211ENST00000638251 NFKBIBQ15653 356 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 SLC4A4Q9Y6R1 1079 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 XDHP47989 1333 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 CDKL5O76039 1030 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 PPP1R1BQ9UD71 204 aaPredicted RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 SNX14Q9Y5W7 946 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 SLC27A2O14975 620 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 NFIXQ14938 502 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 RUFY3Q7L099 469 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 CERS3Q8IU89 383 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 UBAC1Q9BSL1 405 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 LSG1Q9H089 658 aaKnown RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 CNNM2Q9H8M5 875 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 ZNF804BA4D1E1 1349 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 ADAMTS7Q9UKP4 1686 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 A0A0D9SFI3 127 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 ZRSR1Q15695 479 aaKnown RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 TM6SF1Q9BZW5 370 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 KRT23Q9C075 422 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
RTTN-211ENST00000638251 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
RTTN-211ENST00000638251 LDHBP07195 334 aaKnown RBP8.16□□□□□ -1.1
RTTN-211ENST00000638251 PHKA1P46020 1223 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 SLC10A5Q5PT55 438 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 EDC3Q96F86 508 aaKnown RBP8.16□□□□□ -1.1
RTTN-211ENST00000638251 MCM5P33992 734 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 BCAMP50895 628 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 ZMYM1Q5SVZ6 1142 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 TMX3Q96JJ7 454 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 MINDY4BA8MYZ0 360 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 STK3Q13188 491 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 CCDC129Q6ZRS4 1044 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 MFSD6Q6ZSS7 791 aa8.16□□□□□ -1.1
RTTN-211ENST00000638251 SUPT20HQ8NEM7 779 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms