RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.13
CLN6-223ENST00000637823 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.13
CLN6-223ENST00000637823 MYO5AQ9Y4I1 1855 aaKnown RBP14.27□□□□□ -0.13
CLN6-223ENST00000637823 RFX7Q2KHR2 1363 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 ZNF804BA4D1E1 1349 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 GOLIM4O00461 696 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 REC8O95072 547 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 FKBP4Q02790 459 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLN6-223ENST00000637823 R3HDM1Q15032 1099 aaKnown RBP14.26□□□□□ -0.13
CLN6-223ENST00000637823 CAVIN4Q5BKX8 364 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 KBTBD3Q8NAB2 608 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 DIAPH3Q9NSV4 1193 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 GNL3LQ9NVN8 582 aaKnown RBP14.26□□□□□ -0.13
CLN6-223ENST00000637823 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
CLN6-223ENST00000637823 DLEC1Q9Y238 1755 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
CLN6-223ENST00000637823 ATP2B4P23634 1241 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 MCAMP43121 646 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 BCAMP50895 628 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 SCARF1Q14162 830 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 TTF1Q15361 905 aaPredicted RBP14.25□□□□□ -0.13
CLN6-223ENST00000637823 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
CLN6-223ENST00000637823 C15orf52Q6ZUT6 534 aaKnown RBP14.25□□□□□ -0.13
CLN6-223ENST00000637823 FBXO33Q7Z6M2 555 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLN6-223ENST00000637823 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
CLN6-223ENST00000637823 FAM84BQ96KN1 310 aaPredicted RBP14.25□□□□□ -0.13
CLN6-223ENST00000637823 NDUFB9Q9Y6M9 179 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 SLX4Q8IY92 1834 aa14.25□□□□□ -0.13
CLN6-223ENST00000637823 WTIPA6NIX2 430 aaPredicted RBP14.24□□□□□ -0.13
CLN6-223ENST00000637823 ZBTB22O15209 634 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 POLD1P28340 1107 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 ZAP70P43403 619 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 GPSM2P81274 684 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 TBC1D32Q96NH3 1257 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 C22orf23Q9BZE7 217 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
CLN6-223ENST00000637823 SNRKQ9NRH2 765 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
CLN6-223ENST00000637823 SGSM2O43147 1006 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
CLN6-223ENST00000637823 ZBTB7AO95365 584 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 HIBADHP31937 336 aaKnown RBP14.23□□□□□ -0.13
CLN6-223ENST00000637823 GYG1P46976 350 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 CWC27Q6UX04 472 aaKnown RBP14.23□□□□□ -0.13
CLN6-223ENST00000637823 VPS37DQ86XT2 251 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 HMG20BQ9P0W2 317 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 GGA1Q9UJY5 639 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 NSFL1CQ9UNZ2 370 aaKnown RBP14.23□□□□□ -0.13
CLN6-223ENST00000637823 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
CLN6-223ENST00000637823 LTBP1Q14766 1721 aa14.23□□□□□ -0.13
CLN6-223ENST00000637823 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
CLN6-223ENST00000637823 IRS2Q9Y4H2 1338 aa14.22□□□□□ -0.13
CLN6-223ENST00000637823 SEMA3EO15041 775 aa14.22□□□□□ -0.13
CLN6-223ENST00000637823 NMIQ13287 307 aaPredicted RBP14.22□□□□□ -0.13
CLN6-223ENST00000637823 ANTXR1Q9H6X2 564 aa14.22□□□□□ -0.13
CLN6-223ENST00000637823 DENND2AQ9ULE3 1009 aa14.22□□□□□ -0.13
CLN6-223ENST00000637823 RAD50Q92878 1312 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 RNF113AO15541 343 aaKnown RBP14.21□□□□□ -0.13
CLN6-223ENST00000637823 CYP2E1P05181 493 aaPredicted RBP14.21□□□□□ -0.13
CLN6-223ENST00000637823 ZFYP08048 801 aaPredicted RBP14.21□□□□□ -0.13
CLN6-223ENST00000637823 CHRNA5P30532 468 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
CLN6-223ENST00000637823 RASGRF1Q13972 1273 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 ZSCAN25Q6NSZ9 544 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 PI16Q6UXB8 463 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 KIAA1211Q6ZU35 1233 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 MPNDQ8N594 471 aa14.21□□□□□ -0.13
CLN6-223ENST00000637823 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLN6-223ENST00000637823 PDS5AQ29RF7 1337 aaKnown RBP14.2□□□□□ -0.14
CLN6-223ENST00000637823 UFL1O94874 794 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 ANP32AP39687 249 aaKnown RBP14.2□□□□□ -0.14
CLN6-223ENST00000637823 CC2D2BQ6DHV5 1058 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 ZNF804AQ7Z570 1209 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 TBC1D16Q8TBP0 767 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 FAM227BQ96M60 508 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 POLLQ9UGP5 575 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 CCDC88AQ3V6T2 1871 aa14.2□□□□□ -0.14
CLN6-223ENST00000637823 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 KLRK1P26718 216 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 TGFB2P61812 414 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 PRPF40BQ6NWY9 871 aaKnown RBP14.19□□□□□ -0.14
CLN6-223ENST00000637823 TXNRD3Q86VQ6 643 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
CLN6-223ENST00000637823 PIH1D3Q9NQM4 214 aaKnown RBP14.19□□□□□ -0.14
CLN6-223ENST00000637823 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 PSDA5PKW4 1024 aaPredicted RBP14.18□□□□□ -0.14
CLN6-223ENST00000637823 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
CLN6-223ENST00000637823 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 DPP8Q6V1X1 898 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms