RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 USP17L8P0C7I0 530 aa23.93■■□□□ 1.42
CLN6-221ENST00000637494 KRT26Q7Z3Y9 468 aa23.93■■□□□ 1.42
CLN6-221ENST00000637494 MYO3BQ8WXR4 1341 aa23.92■■□□□ 1.42
CLN6-221ENST00000637494 ALDH1L2Q3SY69 923 aa23.92■■□□□ 1.42
CLN6-221ENST00000637494 OGFOD1Q8N543 542 aa23.92■■□□□ 1.42
CLN6-221ENST00000637494 SSH1Q8WYL5 1049 aa23.92■■□□□ 1.42
CLN6-221ENST00000637494 WTIPA6NIX2 430 aaPredicted RBP23.91■■□□□ 1.42
CLN6-221ENST00000637494 ZNF280AP59817 542 aaPredicted RBP23.91■■□□□ 1.42
CLN6-221ENST00000637494 MAP2K1Q02750 393 aaPredicted RBP23.91■■□□□ 1.42
CLN6-221ENST00000637494 GRM1Q13255 1194 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 STRIP1Q5VSL9 837 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 LDHAL6AQ6ZMR3 332 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 SULF1Q8IWU6 871 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 CAPNS2Q96L46 248 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 CNNM1Q9NRU3 951 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 PSME4Q14997 1843 aa23.91■■□□□ 1.42
CLN6-221ENST00000637494 EGFRP00533 1210 aa23.9■■□□□ 1.42
CLN6-221ENST00000637494 CDCA7LQ96GN5 454 aa23.9■■□□□ 1.42
CLN6-221ENST00000637494 MYOZ2Q9NPC6 264 aa23.9■■□□□ 1.42
CLN6-221ENST00000637494 SMC4Q9NTJ3 1288 aa23.9■■□□□ 1.42
CLN6-221ENST00000637494 CT47B1P0C2W7 299 aaPredicted RBP23.89■■□□□ 1.41
CLN6-221ENST00000637494 EPHA10Q5JZY3 1008 aa23.89■■□□□ 1.41
CLN6-221ENST00000637494 TXNRD3Q86VQ6 643 aa23.89■■□□□ 1.41
CLN6-221ENST00000637494 GGA3Q9NZ52 723 aa23.89■■□□□ 1.41
CLN6-221ENST00000637494 TAF5LO75529 589 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 MMP14P50281 582 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 COL13A1Q5TAT6 717 aaPredicted RBP23.88■■□□□ 1.41
CLN6-221ENST00000637494 TTLL5Q6EMB2 1281 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 CYP4F22Q6NT55 531 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 ZNF804AQ7Z570 1209 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 SAPCD2Q86UD0 394 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 HELBQ8NG08 1087 aaPredicted RBP23.88■■□□□ 1.41
CLN6-221ENST00000637494 SUCLG2Q96I99 432 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 HHIPL1Q96JK4 782 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 GMLQ99445 158 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 BEGAINQ9BUH8 593 aa23.88■■□□□ 1.41
CLN6-221ENST00000637494 PLIN1O60240 522 aa23.87■■□□□ 1.41
CLN6-221ENST00000637494 SCARF1Q14162 830 aa23.87■■□□□ 1.41
CLN6-221ENST00000637494 DACT2Q5SW24 774 aa23.87■■□□□ 1.41
CLN6-221ENST00000637494 C2orf69Q8N8R5 385 aa23.87■■□□□ 1.41
CLN6-221ENST00000637494 ZNF594Q96JF6 807 aaPredicted RBP23.87■■□□□ 1.41
CLN6-221ENST00000637494 HDAC9Q9UKV0 1011 aa23.87■■□□□ 1.41
CLN6-221ENST00000637494 UTYO14607 1347 aa23.86■■□□□ 1.41
CLN6-221ENST00000637494 NBPF7P0C2Y1 421 aaPredicted RBP23.86■■□□□ 1.41
CLN6-221ENST00000637494 CTCFP49711 727 aaPredicted RBP23.86■■□□□ 1.41
CLN6-221ENST00000637494 WBP1LQ9NX94 342 aa23.86■■□□□ 1.41
CLN6-221ENST00000637494 ADM5C9JUS6 153 aa23.85■■□□□ 1.41
CLN6-221ENST00000637494 FOXN1O15353 648 aa23.85■■□□□ 1.41
CLN6-221ENST00000637494 KLRK1P26718 216 aa23.85■■□□□ 1.41
CLN6-221ENST00000637494 ANGEL2Q5VTE6 544 aaKnown RBP23.85■■□□□ 1.41
CLN6-221ENST00000637494 C15orf52Q6ZUT6 534 aaKnown RBP23.85■■□□□ 1.41
CLN6-221ENST00000637494 TRMT2AQ8IZ69 625 aaKnown RBP23.85■■□□□ 1.41
CLN6-221ENST00000637494 TNS4Q8IZW8 715 aa23.85■■□□□ 1.41
CLN6-221ENST00000637494 CD209Q9NNX6 404 aa23.85■■□□□ 1.41
CLN6-221ENST00000637494 MAP2K2P36507 400 aa23.84■■□□□ 1.41
CLN6-221ENST00000637494 GTF2IP78347 998 aa23.84■■□□□ 1.41
CLN6-221ENST00000637494 GBA2Q9HCG7 927 aaPredicted RBP23.84■■□□□ 1.41
CLN6-221ENST00000637494 HUNKP57058 714 aa23.83■■□□□ 1.41
CLN6-221ENST00000637494 BICC1Q9H694 974 aaKnown RBP23.83■■□□□ 1.41
CLN6-221ENST00000637494 PITPNM2Q9BZ72 1349 aa23.83■■□□□ 1.4
CLN6-221ENST00000637494 MXD3Q9BW11 206 aa23.82■■□□□ 1.4
CLN6-221ENST00000637494 SNAP23O00161 211 aa23.81■■□□□ 1.4
CLN6-221ENST00000637494 UBE4AQ14139 1066 aa23.81■■□□□ 1.4
CLN6-221ENST00000637494 ASTN2O75129 1339 aaPredicted RBP23.81■■□□□ 1.4
CLN6-221ENST00000637494 MROH5Q6ZUA9 1318 aa23.81■■□□□ 1.4
CLN6-221ENST00000637494 RABL6Q3YEC7 729 aaPredicted RBP23.8■■□□□ 1.4
CLN6-221ENST00000637494 DLK2Q6UY11 383 aa23.8■■□□□ 1.4
CLN6-221ENST00000637494 KIAA0825Q8IV33 1275 aa23.8■■□□□ 1.4
CLN6-221ENST00000637494 CDCA5Q96FF9 252 aa23.8■■□□□ 1.4
CLN6-221ENST00000637494 KAZALD1Q96I82 304 aa23.8■■□□□ 1.4
CLN6-221ENST00000637494 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
CLN6-221ENST00000637494 PRDM10Q9NQV6 1147 aa23.8■■□□□ 1.4
CLN6-221ENST00000637494 IL1R1P14778 569 aa23.79■■□□□ 1.4
CLN6-221ENST00000637494 USP44Q9H0E7 712 aa23.79■■□□□ 1.4
CLN6-221ENST00000637494 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
CLN6-221ENST00000637494 A0A1B0GUL6 1792 aa23.78■■□□□ 1.4
CLN6-221ENST00000637494 POLR2AP24928 1970 aaKnown RBP23.78■■□□□ 1.4
CLN6-221ENST00000637494 THSD7BQ9C0I4 1608 aa23.78■■□□□ 1.4
CLN6-221ENST00000637494 AOC2O75106 756 aa23.78■■□□□ 1.4
CLN6-221ENST00000637494 NOGQ13253 232 aa23.78■■□□□ 1.4
CLN6-221ENST00000637494 NBPF9Q3BBW0 867 aa23.78■■□□□ 1.4
CLN6-221ENST00000637494 NOB1Q9ULX3 412 aaKnown RBP23.78■■□□□ 1.4
CLN6-221ENST00000637494 IRS2Q9Y4H2 1338 aa23.78■■□□□ 1.4
CLN6-221ENST00000637494 WNT10BO00744 389 aa23.77■■□□□ 1.4
CLN6-221ENST00000637494 RGMBQ6NW40 437 aa23.77■■□□□ 1.4
CLN6-221ENST00000637494 PUS3Q9BZE2 481 aaKnown RBP23.77■■□□□ 1.4
CLN6-221ENST00000637494 PCNTO95613 3336 aa23.77■■□□□ 1.4
CLN6-221ENST00000637494 NF2P35240 595 aa23.76■■□□□ 1.39
CLN6-221ENST00000637494 FKBP1AP62942 108 aaKnown RBP23.76■■□□□ 1.39
CLN6-221ENST00000637494 METTL24Q5JXM2 366 aa23.76■■□□□ 1.39
CLN6-221ENST00000637494 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
CLN6-221ENST00000637494 VPS37DQ86XT2 251 aa23.76■■□□□ 1.39
CLN6-221ENST00000637494 ANKRD44Q8N8A2 993 aa23.76■■□□□ 1.39
CLN6-221ENST00000637494 CCDC102AQ96A19 550 aa23.76■■□□□ 1.39
CLN6-221ENST00000637494 UBTFL1P0CB47 393 aaPredicted RBP23.75■■□□□ 1.39
CLN6-221ENST00000637494 HIBADHP31937 336 aaKnown RBP23.75■■□□□ 1.39
CLN6-221ENST00000637494 LBX1P52954 281 aa23.75■■□□□ 1.39
CLN6-221ENST00000637494 BRPF1P55201 1214 aaPredicted RBP23.75■■□□□ 1.39
CLN6-221ENST00000637494 FKBP1BP68106 108 aa23.75■■□□□ 1.39
CLN6-221ENST00000637494 DLGAP5Q15398 846 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms