RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 AKAP2Q9Y2D5 859 aa19.75■□□□□ 0.75
CLN6-216ENST00000636876 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
CLN6-216ENST00000636876 RIMBP2O15034 1052 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 IGHDP01880 384 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 IFIT1P09914 478 aaKnown RBP19.74■□□□□ 0.75
CLN6-216ENST00000636876 SLC5A1P13866 664 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 KLRK1P26718 216 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 RHPN1Q8TCX5 695 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 LPIN2Q92539 896 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 RNF181Q9P0P0 153 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 ZNF609O15014 1411 aa19.74■□□□□ 0.75
CLN6-216ENST00000636876 COL4A5P29400 1685 aa19.73■□□□□ 0.75
CLN6-216ENST00000636876 C9orf131Q5VYM1 1079 aa19.73■□□□□ 0.75
CLN6-216ENST00000636876 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
CLN6-216ENST00000636876 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
CLN6-216ENST00000636876 GCC1Q96CN9 775 aa19.73■□□□□ 0.75
CLN6-216ENST00000636876 DICER1Q9UPY3 1922 aaKnown RBP19.72■□□□□ 0.75
CLN6-216ENST00000636876 A0A1B0GUL7 405 aa19.72■□□□□ 0.75
CLN6-216ENST00000636876 TNNI3KQ59H18 835 aa19.72■□□□□ 0.75
CLN6-216ENST00000636876 FPGT-TNNI3KV9GXZ4 949 aa19.72■□□□□ 0.75
CLN6-216ENST00000636876 TIMM10P62072 90 aa19.71■□□□□ 0.75
CLN6-216ENST00000636876 NIM1KQ8IY84 436 aa19.71■□□□□ 0.75
CLN6-216ENST00000636876 LRRCC1Q9C099 1032 aa19.71■□□□□ 0.75
CLN6-216ENST00000636876 IL1RAPL2Q9NP60 686 aa19.71■□□□□ 0.75
CLN6-216ENST00000636876 CEP350Q5VT06 3117 aa19.71■□□□□ 0.75
CLN6-216ENST00000636876 ARAP2Q8WZ64 1704 aa19.71■□□□□ 0.75
CLN6-216ENST00000636876 DOK7Q18PE1 504 aa19.7■□□□□ 0.74
CLN6-216ENST00000636876 ZNF804AQ7Z570 1209 aa19.7■□□□□ 0.74
CLN6-216ENST00000636876 SMC5Q8IY18 1101 aa19.7■□□□□ 0.74
CLN6-216ENST00000636876 JDP2Q8WYK2 163 aa19.7■□□□□ 0.74
CLN6-216ENST00000636876 FAM84BQ96KN1 310 aaPredicted RBP19.7■□□□□ 0.74
CLN6-216ENST00000636876 G3V3G9 751 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 ADORA1P30542 326 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 GYG1P46976 350 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 DCAF8Q5TAQ9 597 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 FBXO33Q7Z6M2 555 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 CLASRPQ8N2M8 674 aaKnown RBP19.69■□□□□ 0.74
CLN6-216ENST00000636876 EAF2Q96CJ1 260 aaPredicted RBP19.69■□□□□ 0.74
CLN6-216ENST00000636876 NEUROD6Q96NK8 337 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 COA1Q9GZY4 146 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 DBNDD1Q9H9R9 158 aa19.69■□□□□ 0.74
CLN6-216ENST00000636876 SMARCA5O60264 1052 aaPredicted RBP19.68■□□□□ 0.74
CLN6-216ENST00000636876 ECE2O60344 883 aa19.68■□□□□ 0.74
CLN6-216ENST00000636876 HIBADHP31937 336 aaKnown RBP19.68■□□□□ 0.74
CLN6-216ENST00000636876 CAVIN4Q5BKX8 364 aa19.68■□□□□ 0.74
CLN6-216ENST00000636876 AACSQ86V21 672 aa19.68■□□□□ 0.74
CLN6-216ENST00000636876 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
CLN6-216ENST00000636876 ZNRF3Q9ULT6 936 aa19.68■□□□□ 0.74
CLN6-216ENST00000636876 TIAM2Q8IVF5 1701 aa19.68■□□□□ 0.74
CLN6-216ENST00000636876 BCAMP50895 628 aa19.67■□□□□ 0.74
CLN6-216ENST00000636876 ZNF526Q8TF50 670 aaPredicted RBP19.67■□□□□ 0.74
CLN6-216ENST00000636876 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
CLN6-216ENST00000636876 YDJCA8MPS7 323 aa19.66■□□□□ 0.74
CLN6-216ENST00000636876 FZD9O00144 591 aa19.66■□□□□ 0.74
CLN6-216ENST00000636876 ANKRD45Q5TZF3 282 aa19.66■□□□□ 0.74
CLN6-216ENST00000636876 PODNQ7Z5L7 613 aa19.66■□□□□ 0.74
CLN6-216ENST00000636876 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
CLN6-216ENST00000636876 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
CLN6-216ENST00000636876 CCDC8Q9H0W5 538 aaPredicted RBP19.66■□□□□ 0.74
CLN6-216ENST00000636876 TLR7Q9NYK1 1049 aaKnown RBP19.66■□□□□ 0.74
CLN6-216ENST00000636876 DBNLQ9UJU6 430 aaKnown RBP19.66■□□□□ 0.74
CLN6-216ENST00000636876 ZC3H4Q9UPT8 1303 aaKnown RBP19.66■□□□□ 0.74
CLN6-216ENST00000636876 IL1R1P14778 569 aa19.65■□□□□ 0.74
CLN6-216ENST00000636876 PHKA1P46020 1223 aa19.65■□□□□ 0.74
CLN6-216ENST00000636876 GORABQ5T7V8 394 aa19.65■□□□□ 0.74
CLN6-216ENST00000636876 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
CLN6-216ENST00000636876 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
CLN6-216ENST00000636876 GPBP1L1Q9HC44 474 aaPredicted RBP19.65■□□□□ 0.74
CLN6-216ENST00000636876 IFIT2P09913 472 aaKnown RBP19.64■□□□□ 0.73
CLN6-216ENST00000636876 CCDC102BQ68D86 513 aa19.64■□□□□ 0.73
CLN6-216ENST00000636876 TDRD7Q8NHU6 1098 aaKnown RBP19.64■□□□□ 0.73
CLN6-216ENST00000636876 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
CLN6-216ENST00000636876 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
CLN6-216ENST00000636876 SCN9AQ15858 1988 aa19.64■□□□□ 0.73
CLN6-216ENST00000636876 KDM2BQ8NHM5 1336 aa19.63■□□□□ 0.73
CLN6-216ENST00000636876 ZNF541Q9H0D2 1346 aa19.63■□□□□ 0.73
CLN6-216ENST00000636876 EIF6P56537 245 aaKnown RBP19.63■□□□□ 0.73
CLN6-216ENST00000636876 B4GALNT3Q6L9W6 998 aa19.63■□□□□ 0.73
CLN6-216ENST00000636876 KCNQ5Q9NR82 932 aa19.63■□□□□ 0.73
CLN6-216ENST00000636876 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
CLN6-216ENST00000636876 RAD17O75943 681 aa19.62■□□□□ 0.73
CLN6-216ENST00000636876 NUCB1Q02818 461 aa19.62■□□□□ 0.73
CLN6-216ENST00000636876 CXCL9Q07325 125 aa19.62■□□□□ 0.73
CLN6-216ENST00000636876 IQSEC3Q9UPP2 1182 aaPredicted RBP19.62■□□□□ 0.73
CLN6-216ENST00000636876 ZBTB22O15209 634 aa19.61■□□□□ 0.73
CLN6-216ENST00000636876 CCDC158Q5M9N0 1113 aa19.61■□□□□ 0.73
CLN6-216ENST00000636876 CIAPIN1Q6FI81 312 aa19.61■□□□□ 0.73
CLN6-216ENST00000636876 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
CLN6-216ENST00000636876 PSME4Q14997 1843 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 FAM205AQ6ZU69 1335 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 USP17L3A6NCW0 530 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 USP17L4A6NCW7 530 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 SEMA3EO15041 775 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 FRAT2O75474 233 aaPredicted RBP19.6■□□□□ 0.73
CLN6-216ENST00000636876 UQCRFS1P1P0C7P4 283 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 ARID4AP29374 1257 aaPredicted RBP19.6■□□□□ 0.73
CLN6-216ENST00000636876 TNIP1Q15025 636 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 TTC39AQ5SRH9 613 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 USP17L1Q7RTZ2 530 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms