RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 SLC51AQ86UW1 340 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 RPAP2Q8IXW5 612 aaPredicted RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 KLHDC4Q8TBB5 520 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 GPR101Q96P66 508 aaPredicted RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 ZNF541Q9H0D2 1346 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 VIL1P09327 827 aaKnown RBP10.18□□□□□ -0.78
PNKP-226ENST00000636840 MMP14P50281 582 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 PUM3Q15397 648 aaKnown RBP10.18□□□□□ -0.78
PNKP-226ENST00000636840 HSP90AB4PQ58FF6 505 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 TTLL5Q6EMB2 1281 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 DPF2Q92785 391 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
PNKP-226ENST00000636840 PSMD14O00487 310 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 KIF3CO14782 793 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 SURF6O75683 361 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 EPHX2P34913 555 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 RRP1P56182 461 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 STRIP1Q5VSL9 837 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 AGBL3Q8NEM8 1001 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 RBM46Q8TBY0 533 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 SSH3Q8TE77 659 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 LPIN2Q92539 896 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 CD209Q9NNX6 404 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 ADARB2Q9NS39 739 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 ZBTB40Q9NUA8 1239 aa10.17□□□□□ -0.78
PNKP-226ENST00000636840 GNL3LQ9NVN8 582 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 CNOT7Q9UIV1 285 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 PA2G4Q9UQ80 394 aaKnown RBP10.17□□□□□ -0.78
PNKP-226ENST00000636840 MYO3BQ8WXR4 1341 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 PNMA6EA0A0J9YXQ4 647 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 YDJCA8MPS7 323 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 SNAP23O00161 211 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 GMPSP49915 693 aaPredicted RBP10.16□□□□□ -0.78
PNKP-226ENST00000636840 GTF2IP78347 998 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 FSTL1Q12841 308 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 ATP2B3Q16720 1220 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
PNKP-226ENST00000636840 GORABQ5T7V8 394 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 RSBN1LQ6PCB5 846 aaPredicted RBP10.16□□□□□ -0.78
PNKP-226ENST00000636840 USP50Q70EL3 339 aaPredicted RBP10.16□□□□□ -0.78
PNKP-226ENST00000636840 ATG9AQ7Z3C6 839 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 TXNRD3Q86VQ6 643 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 ERC1Q8IUD2 1116 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 SMC1BQ8NDV3 1235 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
PNKP-226ENST00000636840 C1orf115Q9H7X2 142 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 HDAC9Q9UKV0 1011 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 LRRC37AA6NMS7 1700 aa10.16□□□□□ -0.78
PNKP-226ENST00000636840 WTIPA6NIX2 430 aaPredicted RBP10.15□□□□□ -0.78
PNKP-226ENST00000636840 POTECB2RU33 542 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 SASH1O94885 1247 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 IL1R1P14778 569 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 EPS15P42566 896 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 C1QTNF8P60827 252 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 AAMPQ13685 434 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 POLA2Q14181 598 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 C20orf194Q5TEA3 1177 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 CEP85Q6P2H3 762 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 FAM84BQ96KN1 310 aaPredicted RBP10.15□□□□□ -0.78
PNKP-226ENST00000636840 NEUROD6Q96NK8 337 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 KCNQ5Q9NR82 932 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 GPRC5DQ9NZD1 345 aa10.15□□□□□ -0.78
PNKP-226ENST00000636840 USP17L8P0C7I0 530 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 FGFR2P21802 821 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 GYG1P46976 350 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 SCNN1DP51172 638 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 TFCP2Q12800 502 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 FBXO33Q7Z6M2 555 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 LDHDQ86WU2 507 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 VGLL2Q8N8G2 317 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 TDRD7Q8NHU6 1098 aaKnown RBP10.14□□□□□ -0.79
PNKP-226ENST00000636840 TBC1D22AQ8WUA7 517 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 GPR108Q9NPR9 543 aa10.14□□□□□ -0.79
PNKP-226ENST00000636840 NOP58Q9Y2X3 529 aaKnown RBP10.14□□□□□ -0.79
PNKP-226ENST00000636840 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
PNKP-226ENST00000636840 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 KLRK1P26718 216 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 BCAMP50895 628 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 TIMM10P62072 90 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 FKBP1AP62942 108 aaKnown RBP10.13□□□□□ -0.79
PNKP-226ENST00000636840 DACT2Q5SW24 774 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 RBM26Q5T8P6 1007 aaKnown RBP10.13□□□□□ -0.79
PNKP-226ENST00000636840 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 ZC3H15Q8WU90 426 aaKnown RBP10.13□□□□□ -0.79
PNKP-226ENST00000636840 SUPT16HQ9Y5B9 1047 aaKnown RBP10.13□□□□□ -0.79
PNKP-226ENST00000636840 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
PNKP-226ENST00000636840 COL4A1P02462 1669 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 SPEF2Q9C093 1822 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 A0A1B0GUL7 405 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 SEMA3EO15041 775 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 CHAF1AQ13111 956 aaPredicted RBP10.12□□□□□ -0.79
PNKP-226ENST00000636840 CCDC158Q5M9N0 1113 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 WDR66Q8TBY9 1149 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
PNKP-226ENST00000636840 DENND2AQ9ULE3 1009 aa10.12□□□□□ -0.79
PNKP-226ENST00000636840 DUOX1Q9NRD9 1551 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms