RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PUS3Q9BZE2 481 aaKnown RBP18.75■□□□□ 0.59
CLN8-209ENST00000635970 ZNF277Q9NRM2 450 aaPredicted RBP18.75■□□□□ 0.59
CLN8-209ENST00000635970 NSFL1CQ9UNZ2 370 aaKnown RBP18.75■□□□□ 0.59
CLN8-209ENST00000635970 HDAC5Q9UQL6 1122 aa18.75■□□□□ 0.59
CLN8-209ENST00000635970 COL4A5P29400 1685 aa18.74■□□□□ 0.59
CLN8-209ENST00000635970 CDC45O75419 566 aa18.74■□□□□ 0.59
CLN8-209ENST00000635970 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
CLN8-209ENST00000635970 MPNDQ8N594 471 aa18.74■□□□□ 0.59
CLN8-209ENST00000635970 ANP32BQ92688 251 aaKnown RBP18.74■□□□□ 0.59
CLN8-209ENST00000635970 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
CLN8-209ENST00000635970 LTBP3Q9NS15 1303 aa18.74■□□□□ 0.59
CLN8-209ENST00000635970 PNMA6EA0A0J9YXQ4 647 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 SRGAP3O43295 1099 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 KLHL40Q2TBA0 621 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 TBC1D9Q6ZT07 1266 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 WTIPA6NIX2 430 aaPredicted RBP18.73■□□□□ 0.59
CLN8-209ENST00000635970 GPR101Q96P66 508 aaPredicted RBP18.73■□□□□ 0.59
CLN8-209ENST00000635970 PPP1R9BQ96SB3 815 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 PSMD1Q99460 953 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
CLN8-209ENST00000635970 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
CLN8-209ENST00000635970 MTX1Q13505 466 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 RABEP1Q15276 862 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 LRRC24Q50LG9 513 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 CNNM1Q9NRU3 951 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 RNF181Q9P0P0 153 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 PA2G4Q9UQ80 394 aaKnown RBP18.72■□□□□ 0.59
CLN8-209ENST00000635970 TPM2P07951 284 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 NUCB2P80303 420 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 CHRNDQ07001 517 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 HELBQ8NG08 1087 aaPredicted RBP18.72■□□□□ 0.59
CLN8-209ENST00000635970 POLLQ9UGP5 575 aa18.72■□□□□ 0.59
CLN8-209ENST00000635970 LMNB1P20700 586 aa18.71■□□□□ 0.59
CLN8-209ENST00000635970 SIL1Q9H173 461 aa18.71■□□□□ 0.59
CLN8-209ENST00000635970 XDHP47989 1333 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 TAF5LO75529 589 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 TBC1D16Q8TBP0 767 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 RTFDC1Q9BY42 306 aaPredicted RBP18.7■□□□□ 0.58
CLN8-209ENST00000635970 SNAP23O00161 211 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 UFL1O94874 794 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 HSP90AA2PQ14568 343 aaPredicted RBP18.7■□□□□ 0.58
CLN8-209ENST00000635970 AOC3Q16853 763 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 CEP85Q6P2H3 762 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 PODXL2Q9NZ53 605 aa18.7■□□□□ 0.58
CLN8-209ENST00000635970 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
CLN8-209ENST00000635970 IARSP41252 1262 aaKnown RBP18.69■□□□□ 0.58
CLN8-209ENST00000635970 CWC22Q9HCG8 908 aaKnown RBP18.69■□□□□ 0.58
CLN8-209ENST00000635970 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
CLN8-209ENST00000635970 GGA1Q9UJY5 639 aa18.68■□□□□ 0.58
CLN8-209ENST00000635970 RIPOR2Q9Y4F9 1068 aa18.68■□□□□ 0.58
CLN8-209ENST00000635970 ATP8B2P98198 1209 aa18.68■□□□□ 0.58
CLN8-209ENST00000635970 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
CLN8-209ENST00000635970 ZNF445P59923 1031 aa18.67■□□□□ 0.58
CLN8-209ENST00000635970 COPRSQ9NQ92 184 aa18.67■□□□□ 0.58
CLN8-209ENST00000635970 EYA2O00167 538 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 RIMBP2O15034 1052 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
CLN8-209ENST00000635970 KLRK1P26718 216 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 NASPP49321 788 aaPredicted RBP18.66■□□□□ 0.58
CLN8-209ENST00000635970 TERF1P54274 439 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 POLA2Q14181 598 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 ATG9AQ7Z3C6 839 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 SUPT20HQ8NEM7 779 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 SSH3Q8TE77 659 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 METTL24Q5JXM2 366 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 LARGE2Q8N3Y3 721 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 ANKRD2Q9GZV1 360 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
CLN8-209ENST00000635970 ATP2B4P23634 1241 aa18.65■□□□□ 0.58
CLN8-209ENST00000635970 WASHC4Q2M389 1173 aa18.65■□□□□ 0.58
CLN8-209ENST00000635970 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
CLN8-209ENST00000635970 DDX49Q9Y6V7 483 aaKnown RBP18.65■□□□□ 0.58
CLN8-209ENST00000635970 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
CLN8-209ENST00000635970 MROH5Q6ZUA9 1318 aa18.65■□□□□ 0.58
CLN8-209ENST00000635970 SCN9AQ15858 1988 aa18.65■□□□□ 0.58
CLN8-209ENST00000635970 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.58
CLN8-209ENST00000635970 KIAA2012Q0VF49 1180 aa18.64■□□□□ 0.58
CLN8-209ENST00000635970 ZSCAN30Q86W11 494 aa18.64■□□□□ 0.58
CLN8-209ENST00000635970 VGLL2Q8N8G2 317 aa18.64■□□□□ 0.58
CLN8-209ENST00000635970 KCNJ4P48050 445 aa18.64■□□□□ 0.57
CLN8-209ENST00000635970 TXNRD3Q86VQ6 643 aa18.64■□□□□ 0.57
CLN8-209ENST00000635970 CIAO1O76071 339 aa18.63■□□□□ 0.57
CLN8-209ENST00000635970 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
CLN8-209ENST00000635970 EYA3Q99504 573 aa18.63■□□□□ 0.57
CLN8-209ENST00000635970 LEMD3Q9Y2U8 911 aa18.63■□□□□ 0.57
CLN8-209ENST00000635970 YY1P25490 414 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 PLEKHM2Q8IWE5 1019 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 DBNDD1Q9H9R9 158 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.62■□□□□ 0.57
CLN8-209ENST00000635970 ARAP2Q8WZ64 1704 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 MED23Q9ULK4 1368 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 PDE8BO95263 885 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 CYP2E1P05181 493 aaPredicted RBP18.62■□□□□ 0.57
CLN8-209ENST00000635970 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 TTC22Q5TAA0 569 aa18.62■□□□□ 0.57
CLN8-209ENST00000635970 RPAP2Q8IXW5 612 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms