RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 PODNQ7Z5L7 613 aa12.12□□□□□ -0.47
LINC00339-210ENST00000635675 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
LINC00339-210ENST00000635675 PA2G4Q9UQ80 394 aaKnown RBP12.12□□□□□ -0.47
LINC00339-210ENST00000635675 G3V3G9 751 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 POLA2Q14181 598 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 TNIP1Q15025 636 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 SIL1Q9H173 461 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 CHMP4BQ9H444 224 aaKnown RBP12.11□□□□□ -0.47
LINC00339-210ENST00000635675 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
LINC00339-210ENST00000635675 IL15P40933 162 aaPredicted RBP12.11□□□□□ -0.47
LINC00339-210ENST00000635675 PSMD14O00487 310 aa12.1□□□□□ -0.47
LINC00339-210ENST00000635675 VIL1P09327 827 aaKnown RBP12.1□□□□□ -0.47
LINC00339-210ENST00000635675 FGFR2P21802 821 aa12.1□□□□□ -0.47
LINC00339-210ENST00000635675 SCNN1DP51172 638 aa12.1□□□□□ -0.47
LINC00339-210ENST00000635675 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
LINC00339-210ENST00000635675 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
LINC00339-210ENST00000635675 SCN4AP35499 1836 aa12.1□□□□□ -0.47
LINC00339-210ENST00000635675 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
LINC00339-210ENST00000635675 IL1R1P14778 569 aa12.09□□□□□ -0.47
LINC00339-210ENST00000635675 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
LINC00339-210ENST00000635675 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-210ENST00000635675 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
LINC00339-210ENST00000635675 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
LINC00339-210ENST00000635675 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 TOMM70O94826 608 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 EPS15P42566 896 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 GYG1P46976 350 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-210ENST00000635675 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 ZNF804AQ7Z570 1209 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 FBXO33Q7Z6M2 555 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 RPAP2Q8IXW5 612 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-210ENST00000635675 DPF2Q92785 391 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-210ENST00000635675 GPRC5DQ9NZD1 345 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 NOP58Q9Y2X3 529 aaKnown RBP12.08□□□□□ -0.48
LINC00339-210ENST00000635675 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-210ENST00000635675 PSME4Q14997 1843 aa12.08□□□□□ -0.48
LINC00339-210ENST00000635675 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
LINC00339-210ENST00000635675 HIBADHP31937 336 aaKnown RBP12.07□□□□□ -0.48
LINC00339-210ENST00000635675 EPHX2P34913 555 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 TFCP2Q12800 502 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00339-210ENST00000635675 DACT2Q5SW24 774 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 LPIN2Q92539 896 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 GMLQ99445 158 aa12.07□□□□□ -0.48
LINC00339-210ENST00000635675 ZNF609O15014 1411 aa12.06□□□□□ -0.48
LINC00339-210ENST00000635675 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 SASH1O94885 1247 aa12.06□□□□□ -0.48
LINC00339-210ENST00000635675 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 LMOD1P29536 600 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
LINC00339-210ENST00000635675 TTLL5Q6EMB2 1281 aa12.06□□□□□ -0.48
LINC00339-210ENST00000635675 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 AGBL3Q8NEM8 1001 aa12.06□□□□□ -0.48
LINC00339-210ENST00000635675 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 CNOT7Q9UIV1 285 aaKnown RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 ZNF646O15015 1829 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-210ENST00000635675 SLC5A1P13866 664 aa12.05□□□□□ -0.48
LINC00339-210ENST00000635675 BCAMP50895 628 aa12.05□□□□□ -0.48
LINC00339-210ENST00000635675 GTF2IP78347 998 aa12.05□□□□□ -0.48
LINC00339-210ENST00000635675 CAVIN4Q5BKX8 364 aa12.05□□□□□ -0.48
LINC00339-210ENST00000635675 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
LINC00339-210ENST00000635675 AKAP2Q9Y2D5 859 aa12.05□□□□□ -0.48
LINC00339-210ENST00000635675 SUPT16HQ9Y5B9 1047 aaKnown RBP12.05□□□□□ -0.48
LINC00339-210ENST00000635675 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
LINC00339-210ENST00000635675 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 POTEIP0CG38 1075 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 TIMM10P62072 90 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 PNMA8AQ86V59 439 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-210ENST00000635675 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 CRBNQ96SW2 442 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 MXD3Q9BW11 206 aa12.04□□□□□ -0.48
LINC00339-210ENST00000635675 ADARB2Q9NS39 739 aaKnown RBP12.04□□□□□ -0.48
LINC00339-210ENST00000635675 A0A1B0GUL7 405 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 HMMRO75330 724 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 USP50Q70EL3 339 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-210ENST00000635675 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 CERS5Q8N5B7 392 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 GPR108Q9NPR9 543 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 MYO3BQ8WXR4 1341 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 H7C1D1 291 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 USP17L8P0C7I0 530 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 ADORA1P30542 326 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 HIRAP54198 1017 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-210ENST00000635675 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-210ENST00000635675 FKBP1AP62942 108 aaKnown RBP12.03□□□□□ -0.48
LINC00339-210ENST00000635675 OS9Q13438 667 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-210ENST00000635675 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms