RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TM4SF5O14894 197 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 F13BP05160 661 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 FOSL1P15407 271 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 ITGB5P18084 799 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 PTPRAP18433 802 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 PTK7Q13308 1070 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 COL19A1Q14993 1142 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 MSMPQ1L6U9 139 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 TTC39BQ5VTQ0 682 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 NFXL1Q6ZNB6 911 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 CBLL1Q75N03 491 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 VSIG10LQ86VR7 867 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 ANKMY2Q8IV38 441 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 SHISA5Q8N114 240 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 CACTIN-AS1Q8N1I8 211 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 SLC7A3Q8WY07 619 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 FBXL18Q96ME1 805 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 RUSC1Q9BVN2 902 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 RNF208Q9H0X6 261 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 SEC31BQ9NQW1 1179 aa2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 MAFBQ9Y5Q3 323 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-209ENST00000635578 A6NJR5 290 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L15C9J2P7 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L10C9JJH3 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L13C9JLJ4 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L12C9JPN9 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L11C9JVI0 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L21D6R901 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L18D6R9N7 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L22D6RA61 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L17D6RBQ6 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L19D6RCP7 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L20D6RJB6 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 CYP26A1O43174 497 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 FOXO3O43524 673 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 CYP2E1P05181 493 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 JUNBP17275 347 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 USP17L24Q0WX57 530 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 NFKBIBQ15653 356 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 COX20Q5RI15 118 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 NCAPG2Q86XI2 1143 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 ETFBKMTQ8IXQ9 262 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 C12orf50Q8NA57 414 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 OR13H1Q8NG92 308 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 MYO19Q96H55 970 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 PBX4Q9BYU1 374 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 LRRC4CQ9HCJ2 640 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 BSDC1Q9NW68 430 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 HIF3AQ9Y2N7 669 aa2.62□□□□□ -1.99
SMARCB1-209ENST00000635578 FAM95CA0A1B0GW59 222 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 H3BRJ5 948 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 PRNPP04156 253 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 UBTFP17480 764 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 WEE1P30291 646 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 ADMP35318 185 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 USP11P51784 963 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 CABP4P57796 275 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 PKN1Q16512 942 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 FBLN7Q53RD9 439 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 FAM26DQ5JW98 314 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 NUTM2GQ5VZR2 741 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 HGSNATQ68CP4 663 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 PAOXQ6QHF9 649 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 SPOCD1Q6ZMY3 1216 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 FBLIM1Q8WUP2 373 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 GLMNQ92990 594 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 POP1Q99575 1024 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 USP26Q9BXU7 913 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 ZMYND15Q9H091 742 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 PAK6Q9NQU5 681 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 KANSL3Q9P2N6 904 aa2.61□□□□□ -1.99
SMARCB1-209ENST00000635578 FAM170BA6NMN3 283 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 DBX1A6NMT0 343 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 PAPLNO95428 1278 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 DRD2P14416 443 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 ACPPP15309 386 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 PIP4K2BP78356 416 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 FKBP5Q13451 457 aaPredicted RBP2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 PLCL1Q15111 1095 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 TMEM132AQ24JP5 1023 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 KANK4Q5T7N3 995 aaPredicted RBP2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 AGBL5Q8NDL9 886 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 PIK3R5Q8WYR1 880 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 PRIMPOLQ96LW4 560 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 TBC1D32Q96NH3 1257 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 SAP130Q9H0E3 1048 aa2.6□□□□□ -1.99
SMARCB1-209ENST00000635578 FAM196BA6NMK8 535 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 TRPA1O75762 1119 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 ZNF865P0CJ78 1059 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 C19orf57Q0VDD7 668 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 ZNF792Q3KQV3 632 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 CDPF1Q6NVV7 123 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 ZNF574Q6ZN55 896 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 KSR1Q8IVT5 923 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 CEP120Q8N960 986 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 CCER1Q8TC90 406 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 GPR152Q8TDT2 470 aa2.59□□□□□ -1.99
SMARCB1-209ENST00000635578 ARXQ96QS3 562 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms