RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 KANSL3Q9P2N6 904 aa10.99□□□□□ -0.65
SMARCA2-239ENST00000635388 E9PSI1 815 aa10.98□□□□□ -0.65
SMARCA2-239ENST00000635388 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-239ENST00000635388 ZNF787Q6DD87 383 aa10.98□□□□□ -0.65
SMARCA2-239ENST00000635388 FAM161BQ96MY7 647 aa10.98□□□□□ -0.65
SMARCA2-239ENST00000635388 KIF4AO95239 1232 aa10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 RECKO95980 971 aa10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 CES1P23141 567 aa10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 GNA15P30679 374 aa10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 EPS8L3Q8TE67 593 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 SALL4Q9UJQ4 1053 aa10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
SMARCA2-239ENST00000635388 TEX14Q8IWB6 1497 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 TERTO14746 1132 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 BMP4P12644 408 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 MX2P20592 715 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 SYT9Q86SS6 491 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 PMEPA1Q969W9 287 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 MDFIQ99750 246 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 IGSF5Q9NSI5 407 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 KLF15Q9UIH9 416 aa10.96□□□□□ -0.65
SMARCA2-239ENST00000635388 ATP10BO94823 1461 aa10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 NUP153P49790 1475 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 PSAPP07602 524 aa10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 AVENQ9NQS1 362 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
SMARCA2-239ENST00000635388 PHF20L1A8MW92 1017 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 ZBTB42B2RXF5 422 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 SIN3BO75182 1162 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 NRLP54845 237 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 GPLD1P80108 840 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 PLAURQ03405 335 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 LDLRAD1Q5T700 205 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 TRPM4Q8TD43 1214 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 LATS2Q9NRM7 1088 aa10.94□□□□□ -0.66
SMARCA2-239ENST00000635388 XPCQ01831 940 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 TNFRSF25Q93038 417 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 CNTNAP3BQ96NU0 1288 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 CNTNAP3Q9BZ76 1288 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 PRR12Q9ULL5 1215 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
SMARCA2-239ENST00000635388 HECW1Q76N89 1606 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 ARAFP10398 606 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 ACPPP15309 386 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 PCBP4P57723 403 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 KRT76Q01546 638 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 PSMD2Q13200 908 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 FRMD6Q96NE9 622 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 NSUN5Q96P11 429 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 COL25A1Q9BXS0 654 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 OSBPL7Q9BZF2 842 aa10.92□□□□□ -0.66
SMARCA2-239ENST00000635388 A0A1W2PP55 124 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 EDN3P14138 238 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 KIAA0319Q5VV43 1072 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 CEP120Q8N960 986 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 SPG7Q9UQ90 795 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 AK5Q9Y6K8 562 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 CD109Q6YHK3 1445 aa10.91□□□□□ -0.66
SMARCA2-239ENST00000635388 MAGI3Q5TCQ9 1506 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 SORBS3O60504 671 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 MAP2K3P46734 347 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 HYAL2Q12891 473 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 GLIS3Q8NEA6 775 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 SUV39H2Q9H5I1 410 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 C12orf49Q9H741 205 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 DNAJB12Q9NXW2 375 aaKnown RBP10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 FMN1Q68DA7 1419 aa10.9□□□□□ -0.66
SMARCA2-239ENST00000635388 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 CTSHP09668 335 aa10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 GRM2Q14416 872 aa10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 ZKSCAN3Q9BRR0 538 aa10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 NLRP2Q9NX02 1062 aa10.89□□□□□ -0.67
SMARCA2-239ENST00000635388 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 NFKBIEO00221 500 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 ADH6P28332 368 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 NCAPG2Q86XI2 1143 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 BCO2Q9BYV7 579 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 BACH2Q9BYV9 841 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 UBE2OQ9C0C9 1292 aaKnown RBP10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 NAGPAQ9UK23 515 aa10.88□□□□□ -0.67
SMARCA2-239ENST00000635388 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 LOC102724428A0A0B4J2F2 783 aa10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 GIPC1O14908 333 aa10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 SIK1P57059 783 aa10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 SLC16A10Q8TF71 515 aa10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 MRS2Q9HD23 443 aa10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 DZANK1Q9NVP4 752 aa10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 COL17A1Q9UMD9 1497 aaPredicted RBP10.87□□□□□ -0.67
SMARCA2-239ENST00000635388 TTC37Q6PGP7 1564 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms