RNA–Protein interactions for RNA: ENST00000633364.1

LIMS4-205, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 957 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-205ENST00000633364 BICC1Q9H694 974 aaKnown RBP19.51■□□□□ 0.71
LIMS4-205ENST00000633364 ZNF408Q9H9D4 720 aa19.51■□□□□ 0.71
LIMS4-205ENST00000633364 PGAP2Q9UHJ9 254 aa19.51■□□□□ 0.71
LIMS4-205ENST00000633364 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
LIMS4-205ENST00000633364 UTYO14607 1347 aa19.51■□□□□ 0.71
LIMS4-205ENST00000633364 CNTNAP1P78357 1384 aa19.5■□□□□ 0.71
LIMS4-205ENST00000633364 USP17L8P0C7I0 530 aa19.5■□□□□ 0.71
LIMS4-205ENST00000633364 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.71
LIMS4-205ENST00000633364 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
LIMS4-205ENST00000633364 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
LIMS4-205ENST00000633364 CELF2O95319 508 aaKnown RBP19.49■□□□□ 0.71
LIMS4-205ENST00000633364 USP48Q86UV5 1035 aa19.49■□□□□ 0.71
LIMS4-205ENST00000633364 TXNRD3Q86VQ6 643 aa19.49■□□□□ 0.71
LIMS4-205ENST00000633364 OGFOD1Q8N543 542 aa19.49■□□□□ 0.71
LIMS4-205ENST00000633364 KLRK1P26718 216 aa19.48■□□□□ 0.71
LIMS4-205ENST00000633364 STRIP1Q5VSL9 837 aa19.48■□□□□ 0.71
LIMS4-205ENST00000633364 TTLL5Q6EMB2 1281 aa19.48■□□□□ 0.71
LIMS4-205ENST00000633364 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
LIMS4-205ENST00000633364 ZNF804AQ7Z570 1209 aa19.48■□□□□ 0.71
LIMS4-205ENST00000633364 MYO3BQ8WXR4 1341 aa19.48■□□□□ 0.71
LIMS4-205ENST00000633364 SNAP23O00161 211 aa19.47■□□□□ 0.71
LIMS4-205ENST00000633364 EGFRP00533 1210 aa19.47■□□□□ 0.71
LIMS4-205ENST00000633364 VEGFBP49765 207 aa19.47■□□□□ 0.71
LIMS4-205ENST00000633364 RARSP54136 660 aaKnown RBP19.47■□□□□ 0.71
LIMS4-205ENST00000633364 KAZALD1Q96I82 304 aa19.47■□□□□ 0.71
LIMS4-205ENST00000633364 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
LIMS4-205ENST00000633364 KIF16BQ96L93 1317 aa19.47■□□□□ 0.71
LIMS4-205ENST00000633364 RASSF10A6NK89 507 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 ZNF280AP59817 542 aaPredicted RBP19.46■□□□□ 0.71
LIMS4-205ENST00000633364 GTF2IP78347 998 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 GRM1Q13255 1194 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 DACT2Q5SW24 774 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 CST9Q5W186 159 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 SULF1Q8IWU6 871 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 CD209Q9NNX6 404 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 MYOZ2Q9NPC6 264 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 HDAC5Q9UQL6 1122 aa19.46■□□□□ 0.71
LIMS4-205ENST00000633364 TRPM7Q96QT4 1865 aa19.45■□□□□ 0.7
LIMS4-205ENST00000633364 UBTFL1P0CB47 393 aaPredicted RBP19.45■□□□□ 0.7
LIMS4-205ENST00000633364 HSPA1AP0DMV8 641 aaKnown RBP19.45■□□□□ 0.7
LIMS4-205ENST00000633364 HSPA1BP0DMV9 641 aaKnown RBP19.45■□□□□ 0.7
LIMS4-205ENST00000633364 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
LIMS4-205ENST00000633364 RABL6Q3YEC7 729 aaPredicted RBP19.45■□□□□ 0.7
LIMS4-205ENST00000633364 GMLQ99445 158 aa19.45■□□□□ 0.7
LIMS4-205ENST00000633364 MXD3Q9BW11 206 aa19.45■□□□□ 0.7
LIMS4-205ENST00000633364 GGA3Q9NZ52 723 aa19.45■□□□□ 0.7
LIMS4-205ENST00000633364 HDAC9Q9UKV0 1011 aa19.45■□□□□ 0.7
LIMS4-205ENST00000633364 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
LIMS4-205ENST00000633364 ECE1P42892 770 aa19.44■□□□□ 0.7
LIMS4-205ENST00000633364 SCARF1Q14162 830 aa19.44■□□□□ 0.7
LIMS4-205ENST00000633364 C15orf52Q6ZUT6 534 aaKnown RBP19.44■□□□□ 0.7
LIMS4-205ENST00000633364 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
LIMS4-205ENST00000633364 PUS3Q9BZE2 481 aaKnown RBP19.44■□□□□ 0.7
LIMS4-205ENST00000633364 MROH5Q6ZUA9 1318 aa19.44■□□□□ 0.7
LIMS4-205ENST00000633364 PSME4Q14997 1843 aa19.44■□□□□ 0.7
LIMS4-205ENST00000633364 ZNF609O15014 1411 aa19.43■□□□□ 0.7
LIMS4-205ENST00000633364 UBE4AQ14139 1066 aa19.43■□□□□ 0.7
LIMS4-205ENST00000633364 METTL24Q5JXM2 366 aa19.43■□□□□ 0.7
LIMS4-205ENST00000633364 ANGEL2Q5VTE6 544 aaKnown RBP19.43■□□□□ 0.7
LIMS4-205ENST00000633364 AIDAQ96BJ3 306 aa19.43■□□□□ 0.7
LIMS4-205ENST00000633364 TLL2Q9Y6L7 1015 aa19.43■□□□□ 0.7
LIMS4-205ENST00000633364 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
LIMS4-205ENST00000633364 ADM5C9JUS6 153 aa19.42■□□□□ 0.7
LIMS4-205ENST00000633364 MMP14P50281 582 aa19.42■□□□□ 0.7
LIMS4-205ENST00000633364 VPS37DQ86XT2 251 aa19.42■□□□□ 0.7
LIMS4-205ENST00000633364 KIAA0825Q8IV33 1275 aa19.42■□□□□ 0.7
LIMS4-205ENST00000633364 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
LIMS4-205ENST00000633364 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
LIMS4-205ENST00000633364 CYP4F22Q6NT55 531 aa19.41■□□□□ 0.7
LIMS4-205ENST00000633364 C2orf69Q8N8R5 385 aa19.41■□□□□ 0.7
LIMS4-205ENST00000633364 CAPNS2Q96L46 248 aa19.41■□□□□ 0.7
LIMS4-205ENST00000633364 RIPOR2Q9Y4F9 1068 aa19.41■□□□□ 0.7
LIMS4-205ENST00000633364 IL1R1P14778 569 aa19.4■□□□□ 0.7
LIMS4-205ENST00000633364 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
LIMS4-205ENST00000633364 LRRC24Q50LG9 513 aa19.4■□□□□ 0.7
LIMS4-205ENST00000633364 SAPCD2Q86UD0 394 aa19.4■□□□□ 0.7
LIMS4-205ENST00000633364 KLHDC4Q8TBB5 520 aa19.4■□□□□ 0.7
LIMS4-205ENST00000633364 PCNTO95613 3336 aa19.4■□□□□ 0.7
LIMS4-205ENST00000633364 POLR2AP24928 1970 aaKnown RBP19.39■□□□□ 0.7
LIMS4-205ENST00000633364 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.69
LIMS4-205ENST00000633364 CAVIN4Q5BKX8 364 aa19.39■□□□□ 0.69
LIMS4-205ENST00000633364 DLK2Q6UY11 383 aa19.39■□□□□ 0.69
LIMS4-205ENST00000633364 ASTN2O75129 1339 aaPredicted RBP19.39■□□□□ 0.69
LIMS4-205ENST00000633364 GYG1P46976 350 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 HUNKP57058 714 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
LIMS4-205ENST00000633364 NBPF9Q3BBW0 867 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 BEGAINQ9BUH8 593 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 GBA2Q9HCG7 927 aaPredicted RBP19.38■□□□□ 0.69
LIMS4-205ENST00000633364 JAG2Q9Y219 1238 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 IRS2Q9Y4H2 1338 aa19.38■□□□□ 0.69
LIMS4-205ENST00000633364 A0A1B0GUL6 1792 aa19.37■□□□□ 0.69
LIMS4-205ENST00000633364 F8W031 263 aaPredicted RBP19.37■□□□□ 0.69
LIMS4-205ENST00000633364 BCAR3O75815 825 aa19.37■□□□□ 0.69
LIMS4-205ENST00000633364 PDE8BO95263 885 aa19.37■□□□□ 0.69
LIMS4-205ENST00000633364 GNAI3P08754 354 aa19.37■□□□□ 0.69
LIMS4-205ENST00000633364 LRRFIP2Q9Y608 721 aaKnown RBP19.37■□□□□ 0.69
LIMS4-205ENST00000633364 WNT10BO00744 389 aa19.36■□□□□ 0.69
LIMS4-205ENST00000633364 SASH1O94885 1247 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms