RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 ZMYND15Q9H091 742 aa3.01□□□□□ -1.93
SPTAN1-216ENST00000629047 LRRC4CQ9HCJ2 640 aa3.01□□□□□ -1.93
SPTAN1-216ENST00000629047 RTCBQ9Y3I0 505 aaKnown RBP3.01□□□□□ -1.93
SPTAN1-216ENST00000629047 DCAF1Q9Y4B6 1507 aa3.01□□□□□ -1.93
SPTAN1-216ENST00000629047 XYLBO75191 536 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 MICAL2O94851 1124 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 PSAPP07602 524 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 EPB42P16452 691 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 CDC27P30260 824 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 KRTAP10-2P60368 255 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 CEP135Q66GS9 1140 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 CDPF1Q6NVV7 123 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 LRRC56Q8IYG6 542 aaPredicted RBP3□□□□□ -1.93
SPTAN1-216ENST00000629047 RGL4Q8IZJ4 473 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 AGBL5Q8NDL9 886 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 GLIS3Q8NEA6 775 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 BCL7CQ8WUZ0 217 aaPredicted RBP3□□□□□ -1.93
SPTAN1-216ENST00000629047 GATA6Q92908 595 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 ZNF594Q96JF6 807 aaPredicted RBP3□□□□□ -1.93
SPTAN1-216ENST00000629047 RUSC1Q9BVN2 902 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 RASSF4Q9H2L5 321 aa3□□□□□ -1.93
SPTAN1-216ENST00000629047 QTRT2Q9H974 415 aaKnown RBP3□□□□□ -1.93
SPTAN1-216ENST00000629047 RNASE1P07998 156 aaKnown RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 ZSCAN22P10073 491 aaPredicted RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 KRTAP1-1Q07627 177 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 TRIP4Q15650 581 aaPredicted RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 NFKBIBQ15653 356 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 ANKRD34AQ69YU3 496 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 FDX2Q6P4F2 183 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 CMTR1Q8N1G2 835 aaKnown RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 LRRN4CLQ8ND94 238 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 FBLIM1Q8WUP2 373 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 YTHDC1Q96MU7 727 aaKnown RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 RC3H2Q9HBD1 1191 aaKnown RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 MBNL3Q9NUK0 354 aaKnown RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 KCNMB2Q9Y691 235 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 CCDC180Q9P1Z9 1646 aa2.99□□□□□ -1.93
SPTAN1-216ENST00000629047 DLGAP3O95886 979 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 INHBBP09529 407 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 HOXD8P13378 290 aaPredicted RBP2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 DRD2P14416 443 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 ACPPP15309 386 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 HIF1AQ16665 826 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 ZAR1Q86SH2 424 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 OGFOD1Q8N543 542 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 DCAF11Q8TEB1 546 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 TBC1D32Q96NH3 1257 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 SLC38A3Q99624 504 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 RNF208Q9H0X6 261 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 PRKAG2Q9UGJ0 569 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 HIF3AQ9Y2N7 669 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 U3KQE9 123 aa2.98□□□□□ -1.93
SPTAN1-216ENST00000629047 FAM95CA0A1B0GW59 222 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 USP17L3A6NCW0 530 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 USP17L4A6NCW7 530 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 APBB1O00213 710 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 EGFRP00533 1210 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 CYP2E1P05181 493 aaPredicted RBP2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 MLANAQ16655 118 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 GLIPR1L2Q4G1C9 344 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 ERICH6BQ5W0A0 696 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 DIEXFQ68CQ4 756 aaKnown RBP2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 USP17L2Q6R6M4 530 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 ZNF765Q7L2R6 523 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 USP17L1Q7RTZ2 530 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 STAG2Q8N3U4 1231 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 C20orf173Q96LM9 149 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 MUC3BQ9H195 1237 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 SEC31BQ9NQW1 1179 aa2.97□□□□□ -1.93
SPTAN1-216ENST00000629047 ZNF503-AS2A6NEH8 195 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 LRRC10BA6NIK2 292 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 M0R2N6 131 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 TIAF1O95411 115 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 KRT1P04264 644 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 CD8BP10966 210 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 ARID4AP29374 1257 aaPredicted RBP2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 SOX18P35713 384 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 RAP1GAPP47736 663 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 FAM26DQ5JW98 314 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 SIX5Q8N196 739 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 KLHL23Q8NBE8 558 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 GIMAP7Q8NHV1 300 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 SLC7A3Q8WY07 619 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 FAM84AQ96KN4 292 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 TOX2Q96NM4 488 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 HHIPQ96QV1 700 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 UCN2Q96RP3 112 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 RBSNQ9H1K0 784 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 LRFN2Q9ULH4 789 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 SLC5A6Q9Y289 635 aa2.96□□□□□ -1.94
SPTAN1-216ENST00000629047 BIN1O00499 593 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 TRPA1O75762 1119 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 CPSF6Q16630 551 aaKnown RBP eCLIP2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 FAM117BQ6P1L5 589 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 PAOXQ6QHF9 649 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 ATG4DQ86TL0 474 aaPredicted RBP2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 TRIM50Q86XT4 487 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms