RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 RPS6KB1P23443 525 aa8.83□□□□□ -1
PKP4-217ENST00000628904 FOXO4P98177 505 aa8.83□□□□□ -1
PKP4-217ENST00000628904 NLRP10Q86W26 655 aa8.83□□□□□ -1
PKP4-217ENST00000628904 TRIM5Q9C035 493 aa8.83□□□□□ -1
PKP4-217ENST00000628904 ORC3Q9UBD5 711 aaPredicted RBP8.83□□□□□ -1
PKP4-217ENST00000628904 FGAP02671 866 aa8.83□□□□□ -1
PKP4-217ENST00000628904 AKAP17AQ02040 695 aaKnown RBP8.83□□□□□ -1
PKP4-217ENST00000628904 SASS6Q6UVJ0 657 aa8.83□□□□□ -1
PKP4-217ENST00000628904 FAM43AQ8N2R8 423 aa8.83□□□□□ -1
PKP4-217ENST00000628904 AIFM3Q96NN9 605 aa8.83□□□□□ -1
PKP4-217ENST00000628904 ARHGAP23Q9P227 1491 aa8.83□□□□□ -1
PKP4-217ENST00000628904 CYP2D7A0A087X1C5 515 aa8.83□□□□□ -1
PKP4-217ENST00000628904 ERICH2A1L162 156 aa8.83□□□□□ -1
PKP4-217ENST00000628904 PTPDC1A2A3K4 754 aa8.83□□□□□ -1
PKP4-217ENST00000628904 TOM1O60784 492 aa8.83□□□□□ -1
PKP4-217ENST00000628904 LRRFIP1Q32MZ4 808 aaKnown RBP8.83□□□□□ -1
PKP4-217ENST00000628904 UIMC1Q96RL1 719 aa8.83□□□□□ -1
PKP4-217ENST00000628904 TTC12Q9H892 705 aaPredicted RBP8.83□□□□□ -1
PKP4-217ENST00000628904 SLC4A4Q9Y6R1 1079 aa8.83□□□□□ -1
PKP4-217ENST00000628904 ZNF532Q9HCE3 1301 aa8.83□□□□□ -1
PKP4-217ENST00000628904 TNS3Q68CZ2 1445 aa8.83□□□□□ -1
PKP4-217ENST00000628904 BRD1O95696 1058 aa8.82□□□□□ -1
PKP4-217ENST00000628904 PDCP20941 246 aa8.82□□□□□ -1
PKP4-217ENST00000628904 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
PKP4-217ENST00000628904 TRIM29Q14134 588 aa8.82□□□□□ -1
PKP4-217ENST00000628904 ANKRD1Q15327 319 aa8.82□□□□□ -1
PKP4-217ENST00000628904 USPL1Q5W0Q7 1092 aa8.82□□□□□ -1
PKP4-217ENST00000628904 CCDC73Q6ZRK6 1079 aa8.82□□□□□ -1
PKP4-217ENST00000628904 FILIP1Q7Z7B0 1213 aa8.82□□□□□ -1
PKP4-217ENST00000628904 MAP4K1Q92918 833 aa8.82□□□□□ -1
PKP4-217ENST00000628904 ZSCAN31Q96LW9 406 aaPredicted RBP8.82□□□□□ -1
PKP4-217ENST00000628904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -12e-8■■□□□ 14.2
PKP4-217ENST00000628904 SH3TC1Q8TE82 1336 aa8.82□□□□□ -1
PKP4-217ENST00000628904 E7EWF7 191 aa8.82□□□□□ -1
PKP4-217ENST00000628904 GOLGA6L19H0YKK7 550 aa8.82□□□□□ -1
PKP4-217ENST00000628904 SLC5A1P13866 664 aa8.82□□□□□ -1
PKP4-217ENST00000628904 RFC4P35249 363 aa8.82□□□□□ -1
PKP4-217ENST00000628904 CTSWP56202 376 aa8.82□□□□□ -1
PKP4-217ENST00000628904 KIAA2012Q0VF49 1180 aa8.82□□□□□ -1
PKP4-217ENST00000628904 CCDC102BQ68D86 513 aa8.82□□□□□ -1
PKP4-217ENST00000628904 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
PKP4-217ENST00000628904 ATG9AQ7Z3C6 839 aa8.82□□□□□ -1
PKP4-217ENST00000628904 TTLL11Q8NHH1 800 aa8.82□□□□□ -1
PKP4-217ENST00000628904 ZBTB9Q96C00 473 aa8.82□□□□□ -1
PKP4-217ENST00000628904 C8orf76Q96K31 380 aa8.82□□□□□ -1
PKP4-217ENST00000628904 CCDC69A6NI79 296 aa8.82□□□□□ -1
PKP4-217ENST00000628904 H7C1W4 665 aa8.82□□□□□ -1
PKP4-217ENST00000628904 PES1O00541 588 aaKnown RBP8.82□□□□□ -1
PKP4-217ENST00000628904 RIMBP2O15034 1052 aa8.82□□□□□ -1
PKP4-217ENST00000628904 MAP3K12Q12852 859 aa8.82□□□□□ -1
PKP4-217ENST00000628904 NECTIN1Q15223 517 aa8.82□□□□□ -1
PKP4-217ENST00000628904 TMEM67Q5HYA8 995 aa8.82□□□□□ -1
PKP4-217ENST00000628904 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
PKP4-217ENST00000628904 SLC26A6Q9BXS9 759 aa8.82□□□□□ -1
PKP4-217ENST00000628904 TEX13AQ9BXU3 409 aaPredicted RBP8.82□□□□□ -1
PKP4-217ENST00000628904 NUP62CLQ9H1M0 184 aa8.82□□□□□ -1
PKP4-217ENST00000628904 CCDC87Q9NVE4 849 aa8.82□□□□□ -1
PKP4-217ENST00000628904 LIG1P18858 919 aa8.81□□□□□ -1
PKP4-217ENST00000628904 KRT32Q14532 448 aa8.81□□□□□ -1
PKP4-217ENST00000628904 CPLX2Q6PUV4 134 aaKnown RBP8.81□□□□□ -1
PKP4-217ENST00000628904 SLC4A9Q96Q91 983 aa8.81□□□□□ -1
PKP4-217ENST00000628904 SETDB2Q96T68 719 aa8.81□□□□□ -1
PKP4-217ENST00000628904 FAM13BQ9NYF5 915 aa8.81□□□□□ -1
PKP4-217ENST00000628904 MAST3O60307 1309 aa8.81□□□□□ -1
PKP4-217ENST00000628904 C6orf229H3BNL8 230 aa8.81□□□□□ -1
PKP4-217ENST00000628904 MCAMP43121 646 aa8.81□□□□□ -1
PKP4-217ENST00000628904 PTPN21Q16825 1174 aa8.81□□□□□ -1
PKP4-217ENST00000628904 LUZP1Q86V48 1076 aa8.81□□□□□ -1
PKP4-217ENST00000628904 HAUS7Q99871 368 aa8.81□□□□□ -1
PKP4-217ENST00000628904 SH2B1Q9NRF2 756 aaPredicted RBP8.81□□□□□ -1
PKP4-217ENST00000628904 CCNL1Q9UK58 526 aaPredicted RBP8.81□□□□□ -1
PKP4-217ENST00000628904 USP21Q9UK80 565 aa8.81□□□□□ -1
PKP4-217ENST00000628904 MAP3K15Q6ZN16 1313 aa8.81□□□□□ -1
PKP4-217ENST00000628904 USP32Q8NFA0 1604 aa8.81□□□□□ -1
PKP4-217ENST00000628904 MST1RQ04912 1400 aa8.81□□□□□ -1
PKP4-217ENST00000628904 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
PKP4-217ENST00000628904 MSL1Q68DK7 614 aa8.81□□□□□ -1
PKP4-217ENST00000628904 DHX32Q7L7V1 743 aaKnown RBP8.81□□□□□ -1
PKP4-217ENST00000628904 ANKRD18AQ8IVF6 992 aa8.81□□□□□ -1
PKP4-217ENST00000628904 UBAC1Q9BSL1 405 aa8.81□□□□□ -1
PKP4-217ENST00000628904 SLIT1O75093 1534 aa8.81□□□□□ -1
PKP4-217ENST00000628904 A0A1B0GVL5 298 aa8.8□□□□□ -1
PKP4-217ENST00000628904 KINO60870 393 aaKnown RBP8.8□□□□□ -1
PKP4-217ENST00000628904 SCRN1Q12765 414 aa8.8□□□□□ -1
PKP4-217ENST00000628904 ERFEQ4G0M1 354 aa8.8□□□□□ -1
PKP4-217ENST00000628904 CCDC152Q4G0S7 254 aa8.8□□□□□ -1
PKP4-217ENST00000628904 STOX1Q6ZVD7 989 aa8.8□□□□□ -1
PKP4-217ENST00000628904 ZSWIM6Q9HCJ5 1215 aa8.8□□□□□ -1
PKP4-217ENST00000628904 VAT1LQ9HCJ6 419 aa8.8□□□□□ -1
PKP4-217ENST00000628904 MTMR6Q9Y217 621 aa8.8□□□□□ -1
PKP4-217ENST00000628904 KIF3AQ9Y496 699 aa8.8□□□□□ -1
PKP4-217ENST00000628904 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
PKP4-217ENST00000628904 PDE8AO60658 829 aa8.8□□□□□ -1
PKP4-217ENST00000628904 SLC51AQ86UW1 340 aa8.8□□□□□ -1
PKP4-217ENST00000628904 MARCH10Q8NA82 808 aaPredicted RBP8.8□□□□□ -1
PKP4-217ENST00000628904 UBE2Q2LH0YL09 131 aa8.8□□□□□ -1
PKP4-217ENST00000628904 CAVIN4Q5BKX8 364 aa8.8□□□□□ -1
PKP4-217ENST00000628904 TTC6Q86TZ1 520 aa8.8□□□□□ -1
PKP4-217ENST00000628904 AK7Q96M32 723 aa8.8□□□□□ -1
PKP4-217ENST00000628904 DNAJC25Q9H1X3 360 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms