RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	CD163L1	Q9NR16	1453 aa		9.5	□□□□□ -0.89
LINC02028-223	ENST00000625668	SCNN1D	P51172	638 aa		9.49	□□□□□ -0.89
LINC02028-223	ENST00000625668	MEX3C	Q5U5Q3	659 aa	Known RBP	9.49	□□□□□ -0.89
LINC02028-223	ENST00000625668	ALS2	Q96Q42	1657 aa		9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	CPSF1	Q10570	1443 aa	Known RBP	9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	SLC24A1	O60721	1099 aa		9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	TMC1	Q8TDI8	760 aa		9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	PUS7	Q96PZ0	661 aa	Known RBP	9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	NRK	Q7Z2Y5	1582 aa		9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668		A0A1W2PP64	1363 aa		9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	SSH2	Q76I76	1423 aa		9.48	□□□□□ -0.89
LINC02028-223	ENST00000625668	INHA	P05111	366 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	ARAF	P10398	606 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	EPX	P11678	715 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	ATP4A	P20648	1035 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	BAG6	P46379	1132 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	OXLD1	Q5BKU9	147 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	FIGNL1	Q6PIW4	674 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	TBC1D9	Q6ZT07	1266 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	C1orf216	Q8TAB5	229 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	ZCCHC2	Q9C0B9	1178 aa	Known RBP	9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	SLC12A5	Q9H2X9	1139 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	PRM3	Q9NNZ6	103 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	BRD4	O60885	1362 aa	Predicted RBP	9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	KTN1	Q86UP2	1357 aa	Known RBP	9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	NINL	Q9Y2I6	1382 aa		9.47	□□□□□ -0.89
LINC02028-223	ENST00000625668	ABCA3	Q99758	1704 aa		9.46	□□□□□ -0.89
LINC02028-223	ENST00000625668		K7ELQ4	463 aa	Predicted RBP	9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	PLA2G4A	P47712	749 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	CDCA8	Q53HL2	280 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	XP32	Q5T750	250 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	NUTM2G	Q5VZR2	741 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	NLRP8	Q86W28	1048 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	BTBD6	Q96KE9	485 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	C8orf37	Q96NL8	207 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	SUV39H2	Q9H5I1	410 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	PCDHGC4	Q9Y5F7	938 aa		9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.46	□□□□□ -0.9
LINC02028-223	ENST00000625668	AMPD1	P23109	780 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	GDF10	P55107	478 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	ZNF295-AS1	Q8N0V1	137 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	TERF2IP	Q9NYB0	399 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	HCN2	Q9UL51	889 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	TTC21B	Q7Z4L5	1316 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	CRYBG1	Q9Y4K1	1723 aa		9.45	□□□□□ -0.9
LINC02028-223	ENST00000625668	SMTN	P53814	917 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	VAC14	Q08AM6	782 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	MAP7D1	Q3KQU3	841 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	ABTB2	Q8N961	1025 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	NIFK	Q9BYG3	293 aa	Known RBP	9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	USP19	O94966	1318 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	AFF2	P51816	1311 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	ANKRD36B	Q8N2N9	1353 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	EDC4	Q6P2E9	1401 aa	Known RBP	9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	PHRF1	Q9P1Y6	1649 aa	Known RBP	9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	PIK3C2A	O00443	1686 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	MYOM1	P52179	1685 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	MON2	Q7Z3U7	1717 aa		9.44	□□□□□ -0.9
LINC02028-223	ENST00000625668	AKAP12	Q02952	1782 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	TTC21A	Q8NDW8	1320 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	PIK3R2	O00459	728 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	GNB5	O14775	395 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	DGKG	P49619	791 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	GRIN2C	Q14957	1233 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	POLR3GL	Q9BT43	218 aa		9.43	□□□□□ -0.9
LINC02028-223	ENST00000625668	SLIT3	O75094	1523 aa		9.42	□□□□□ -0.9
LINC02028-223	ENST00000625668	NEURL1B	A8MQ27	555 aa		9.42	□□□□□ -0.9
LINC02028-223	ENST00000625668	FAM182B	Q5T319	152 aa		9.42	□□□□□ -0.9
LINC02028-223	ENST00000625668	NME9	Q86XW9	330 aa		9.42	□□□□□ -0.9
LINC02028-223	ENST00000625668	NGLY1	Q96IV0	654 aa		9.42	□□□□□ -0.9
LINC02028-223	ENST00000625668	SLIT2	O94813	1529 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	KIAA0232	Q92628	1395 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	ATXN7	O15265	892 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	TNP2	Q05952	138 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	ZNF772	Q68DY9	489 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	NLRP13	Q86W25	1043 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	PLPP7	Q8NBV4	271 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	SLC4A9	Q96Q91	983 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	KLF15	Q9UIH9	416 aa		9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC02028-223	ENST00000625668	BCL9L	Q86UU0	1499 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	KIF7	Q2M1P5	1343 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	TMEM229A	B2RXF0	380 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	MAPT	P10636	758 aa	Known RBP	9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	MTFR1	Q15390	333 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	FNBP4	Q8N3X1	1017 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	AIDA	Q96BJ3	306 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	GDPD2	Q9HCC8	539 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	AVEN	Q9NQS1	362 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	PRDM11	Q9NQV5	511 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	USP21	Q9UK80	565 aa		9.4	□□□□□ -0.9
LINC02028-223	ENST00000625668	OVOS2	A0A0J9YW53	1432 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	OVOS2	Q6IE36	1432 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	NSD3	Q9BZ95	1437 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	CPD	O75976	1380 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	USP31	Q70CQ4	1352 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	PLCH1	Q4KWH8	1693 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668		A0A1W2PNR3	127 aa		9.39	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms