RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SKILP12757 684 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 LIG1P18858 919 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 ATP5JP18859 108 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 DACH1Q9UI36 760 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 CCP110O43303 1012 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 PHKG2P15735 406 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 SYKP43405 635 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 TTC6Q86TZ1 520 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 CCDC196A0A1B0GTZ2 297 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 MFSD6Q6ZSS7 791 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 SPTLC2O15270 562 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
MSH6-215ENST00000622629 TTLL7Q6ZT98 887 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 KCNG4Q8TDN1 519 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 ZDHHC9Q9Y397 364 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 LMOD1P29536 600 aaPredicted RBP14.88□□□□□ -0.03
MSH6-215ENST00000622629 POLA2Q14181 598 aa14.88□□□□□ -0.03
MSH6-215ENST00000622629 DBNLQ9UJU6 430 aaKnown RBP14.88□□□□□ -0.03
MSH6-215ENST00000622629 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
MSH6-215ENST00000622629 GPS2Q13227 327 aa14.87□□□□□ -0.03
MSH6-215ENST00000622629 ERCC4Q92889 916 aaPredicted RBP14.87□□□□□ -0.03
MSH6-215ENST00000622629 MAP4K1Q92918 833 aa14.87□□□□□ -0.03
MSH6-215ENST00000622629 ZNF589Q86UQ0 364 aaPredicted RBP14.87□□□□□ -0.03
MSH6-215ENST00000622629 CPS1P31327 1500 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 URI1O94763 535 aaPredicted RBP14.86□□□□□ -0.03
MSH6-215ENST00000622629 SASH1O94885 1247 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 SLC4A8Q2Y0W8 1093 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 CAVIN4Q5BKX8 364 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 PPP4R3BQ5MIZ7 849 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 ERBB4Q15303 1308 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 IRS4O14654 1257 aaPredicted RBP14.86□□□□□ -0.03
MSH6-215ENST00000622629 CCDC102BQ68D86 513 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 TEX35Q5T0J7 233 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 CPLX3Q8WVH0 158 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 UBXN4Q92575 508 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 TMX1Q9H3N1 280 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 CBX8Q9HC52 389 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 MYO3AQ8NEV4 1616 aa14.86□□□□□ -0.03
MSH6-215ENST00000622629 IQCA1Q86XH1 822 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 CCDC191Q8NCU4 936 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 XAGE2Q96GT9 111 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 NEMFO60524 1076 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
MSH6-215ENST00000622629 SMARCE1Q969G3 411 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 UQCRFS1P1P0C7P4 283 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 DHX8Q14562 1220 aaKnown RBP14.85□□□□□ -0.03
MSH6-215ENST00000622629 CEP135Q66GS9 1140 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 ACSBG1Q96GR2 724 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 MROH2AA6NES4 1674 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 TAF5LO75529 589 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 GSDMDP57764 484 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 RNF41Q9H4P4 317 aaPredicted RBP14.85□□□□□ -0.03
MSH6-215ENST00000622629 CEP131Q9UPN4 1083 aa14.85□□□□□ -0.03
MSH6-215ENST00000622629 NOC3LQ8WTT2 800 aaKnown RBP14.84□□□□□ -0.03
MSH6-215ENST00000622629 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSH6-215ENST00000622629 V9GYY5 206 aaPredicted RBP14.84□□□□□ -0.03
MSH6-215ENST00000622629 PIK3C2BO00750 1634 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 VWDEQ8N2E2 1590 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 NAP1L1P55209 391 aaKnown RBP14.84□□□□□ -0.03
MSH6-215ENST00000622629 LRRC24Q50LG9 513 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 DNAJC10Q8IXB1 793 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 TSC1Q92574 1164 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 PCDH11XQ9BZA7 1347 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 PCDH11YQ9BZA8 1340 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 ATP2B2Q01814 1243 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 WTAPQ15007 396 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 MIGA1Q8NAN2 632 aa14.84□□□□□ -0.03
MSH6-215ENST00000622629 CTCFLQ8NI51 663 aaPredicted RBP14.84□□□□□ -0.03
MSH6-215ENST00000622629 CLSTN2Q9H4D0 955 aa14.83□□□□□ -0.03
MSH6-215ENST00000622629 COPRSQ9NQ92 184 aa14.83□□□□□ -0.03
MSH6-215ENST00000622629 BTG4Q9NY30 223 aa14.83□□□□□ -0.03
MSH6-215ENST00000622629 ZNF652Q9Y2D9 606 aa14.83□□□□□ -0.03
MSH6-215ENST00000622629 SLC4A4Q9Y6R1 1079 aa14.83□□□□□ -0.03
MSH6-215ENST00000622629 CRB1P82279 1406 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 NR1I2O75469 434 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 DZIP3Q86Y13 1208 aaKnown RBP14.83□□□□□ -0.04
MSH6-215ENST00000622629 DHX37Q8IY37 1157 aaKnown RBP14.83□□□□□ -0.04
MSH6-215ENST00000622629 B4E1Z4 1266 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 GPAA1O43292 621 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 ZAP70P43403 619 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 ZKSCAN3Q9BRR0 538 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 MAGEC2Q9UBF1 373 aaPredicted RBP14.83□□□□□ -0.04
MSH6-215ENST00000622629 RICTORQ6R327 1708 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 E7EWF7 191 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 KIF2AO00139 706 aaPredicted RBP14.83□□□□□ -0.04
MSH6-215ENST00000622629 CYP7A1P22680 504 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 UBASH3AP57075 661 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 SNW1Q13573 536 aaKnown RBP14.83□□□□□ -0.04
MSH6-215ENST00000622629 TRIM34Q9BYJ4 488 aa14.83□□□□□ -0.04
MSH6-215ENST00000622629 ATP10DQ9P241 1426 aa14.82□□□□□ -0.04
MSH6-215ENST00000622629 ITGA6P23229 1130 aa14.82□□□□□ -0.04
MSH6-215ENST00000622629 TNNT3P45378 269 aaPredicted RBP14.82□□□□□ -0.04
MSH6-215ENST00000622629 FAM160A1Q05DH4 1040 aa14.82□□□□□ -0.04
MSH6-215ENST00000622629 ZC3H13Q5T200 1668 aaKnown RBP14.82□□□□□ -0.04
MSH6-215ENST00000622629 CYP21A2P08686 494 aa14.82□□□□□ -0.04
MSH6-215ENST00000622629 MAGEB6Q8N7X4 407 aa14.82□□□□□ -0.04
MSH6-215ENST00000622629 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms