RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ARAP2Q8WZ64 1704 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 COL16A1Q07092 1604 aaPredicted RBP11.14□□□□□ -0.63
PDPN-212ENST00000621990 CTDNEP1O95476 244 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 ADORA1P30542 326 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 TERF1P54274 439 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 FAM173BQ6P4H8 233 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.14□□□□□ -0.63
PDPN-212ENST00000621990 OSBP2Q969R2 916 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
PDPN-212ENST00000621990 FAM89AQ96GI7 184 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
PDPN-212ENST00000621990 KDM4AO75164 1064 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 ATRNO75882 1429 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 IFIT5Q13325 482 aaKnown RBP11.14□□□□□ -0.63
PDPN-212ENST00000621990 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 SPATA32Q96LK8 384 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 RIPOR2Q9Y4F9 1068 aa11.14□□□□□ -0.63
PDPN-212ENST00000621990 CCDC192P0DO97 292 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 CYP19A1P11511 503 aaPredicted RBP11.13□□□□□ -0.63
PDPN-212ENST00000621990 HSP90B1P14625 803 aaKnown RBP11.13□□□□□ -0.63
PDPN-212ENST00000621990 LIG1P18858 919 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 HMGN5P82970 282 aaKnown RBP11.13□□□□□ -0.63
PDPN-212ENST00000621990 A0A0G2JLW4 131 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
PDPN-212ENST00000621990 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 VGLL2Q8N8G2 317 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 TTLL11Q8NHH1 800 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 DDX19AQ9NUU7 478 aaKnown RBP11.13□□□□□ -0.63
PDPN-212ENST00000621990 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
PDPN-212ENST00000621990 CICQ96RK0 1608 aaPredicted RBP11.12□□□□□ -0.63
PDPN-212ENST00000621990 SCARF1Q14162 830 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 HLFQ16534 295 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 NUP62CLQ9H1M0 184 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 RREB1Q92766 1687 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 ADCY5O95622 1261 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 PDIA3P30101 505 aaKnown RBP11.12□□□□□ -0.63
PDPN-212ENST00000621990 CTSWP56202 376 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 FKBP4Q02790 459 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDPN-212ENST00000621990 APOBRQ0VD83 1088 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 APPBP2Q92624 585 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 PGBD1Q96JS3 809 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 CFAP45Q9UL16 551 aa11.12□□□□□ -0.63
PDPN-212ENST00000621990 AHDC1Q5TGY3 1603 aaPredicted RBP11.11□□□□□ -0.63
PDPN-212ENST00000621990 PTPDC1A2A3K4 754 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 ERVV-1B6SEH8 477 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 TPM2P07951 284 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 FGD1P98174 961 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 CLSTN2Q9H4D0 955 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
PDPN-212ENST00000621990 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 DOT1LQ8TEK3 1739 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 H3BQV1 296 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 IFFO2Q5TF58 517 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 DACT1Q9NYF0 836 aa11.11□□□□□ -0.63
PDPN-212ENST00000621990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDPN-212ENST00000621990 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 ITGA6P23229 1130 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 ZAP70P43403 619 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 ATP2B3Q16720 1220 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 TTLL5Q6EMB2 1281 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 FAM200AQ8TCP9 573 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 GREM2Q9H772 168 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 TYRO3Q06418 890 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 IMMTQ16891 758 aaKnown RBP11.1□□□□□ -0.63
PDPN-212ENST00000621990 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 AK7Q96M32 723 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
PDPN-212ENST00000621990 SLIT2O94813 1529 aa11.1□□□□□ -0.63
PDPN-212ENST00000621990 DOCK2Q92608 1830 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 FGAP02671 866 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 IL6STP40189 918 aaPredicted RBP11.09□□□□□ -0.63
PDPN-212ENST00000621990 MCAMP43121 646 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 MB21D2Q8IYB1 491 aaPredicted RBP11.09□□□□□ -0.63
PDPN-212ENST00000621990 RGS22Q8NE09 1264 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 PUS7LQ9H0K6 701 aaKnown RBP11.09□□□□□ -0.63
PDPN-212ENST00000621990 TNMDQ9H2S6 317 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 CARMIL3Q8ND23 1372 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 ANKRD18BA2A2Z9 1011 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 AP5Z1O43299 807 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 PTMAP06454 111 aaKnown RBP11.09□□□□□ -0.63
PDPN-212ENST00000621990 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 LDHAL6AQ6ZMR3 332 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
PDPN-212ENST00000621990 C4AP0C0L4 1744 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms