RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 POLR2AP24928 1970 aaKnown RBP20.36■□□□□ 0.85
CD40-207ENST00000620709 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
CD40-207ENST00000620709 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
CD40-207ENST00000620709 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
CD40-207ENST00000620709 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
CD40-207ENST00000620709 BEGAINQ9BUH8 593 aa20.36■□□□□ 0.85
CD40-207ENST00000620709 CASP7P55210 303 aa20.35■□□□□ 0.85
CD40-207ENST00000620709 PLA2G12BQ9BX93 195 aa20.35■□□□□ 0.85
CD40-207ENST00000620709 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
CD40-207ENST00000620709 KCNJ4P48050 445 aa20.34■□□□□ 0.85
CD40-207ENST00000620709 PODNQ7Z5L7 613 aa20.34■□□□□ 0.85
CD40-207ENST00000620709 AGBL3Q8NEM8 1001 aa20.34■□□□□ 0.85
CD40-207ENST00000620709 GGA3Q9NZ52 723 aa20.34■□□□□ 0.85
CD40-207ENST00000620709 ASTN2O75129 1339 aaPredicted RBP20.34■□□□□ 0.85
CD40-207ENST00000620709 ANKRD18BA2A2Z9 1011 aa20.33■□□□□ 0.85
CD40-207ENST00000620709 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
CD40-207ENST00000620709 SULF1Q8IWU6 871 aa20.33■□□□□ 0.85
CD40-207ENST00000620709 ANKRD2Q9GZV1 360 aa20.33■□□□□ 0.85
CD40-207ENST00000620709 PRDM10Q9NQV6 1147 aa20.33■□□□□ 0.85
CD40-207ENST00000620709 CSF1RP07333 972 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 USP17L8P0C7I0 530 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 HSPA8P11142 646 aaKnown RBP20.32■□□□□ 0.84
CD40-207ENST00000620709 HUNKP57058 714 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 SCARF1Q14162 830 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 BEND3Q5T5X7 828 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 MXD3Q9BW11 206 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 LEMD3Q9Y2U8 911 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
CD40-207ENST00000620709 PSME4Q14997 1843 aa20.31■□□□□ 0.84
CD40-207ENST00000620709 IFIT5Q13325 482 aaKnown RBP20.31■□□□□ 0.84
CD40-207ENST00000620709 ANGEL2Q5VTE6 544 aaKnown RBP20.31■□□□□ 0.84
CD40-207ENST00000620709 TXNRD3Q86VQ6 643 aa20.31■□□□□ 0.84
CD40-207ENST00000620709 C2orf69Q8N8R5 385 aa20.31■□□□□ 0.84
CD40-207ENST00000620709 C9orf78Q9NZ63 289 aaPredicted RBP20.31■□□□□ 0.84
CD40-207ENST00000620709 KLRK1P26718 216 aa20.3■□□□□ 0.84
CD40-207ENST00000620709 ZNF280AP59817 542 aaPredicted RBP20.3■□□□□ 0.84
CD40-207ENST00000620709 CHRNDQ07001 517 aa20.3■□□□□ 0.84
CD40-207ENST00000620709 TAF7LQ5H9L4 462 aa20.3■□□□□ 0.84
CD40-207ENST00000620709 HELBQ8NG08 1087 aaPredicted RBP20.3■□□□□ 0.84
CD40-207ENST00000620709 COA1Q9GZY4 146 aa20.3■□□□□ 0.84
CD40-207ENST00000620709 GBA2Q9HCG7 927 aaPredicted RBP20.3■□□□□ 0.84
CD40-207ENST00000620709 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
CD40-207ENST00000620709 MAP2K2P36507 400 aa20.29■□□□□ 0.84
CD40-207ENST00000620709 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
CD40-207ENST00000620709 FOXO4P98177 505 aa20.29■□□□□ 0.84
CD40-207ENST00000620709 LMBR1LQ6UX01 489 aa20.29■□□□□ 0.84
CD40-207ENST00000620709 GRM8O00222 908 aa20.28■□□□□ 0.84
CD40-207ENST00000620709 TAF5LO75529 589 aa20.28■□□□□ 0.84
CD40-207ENST00000620709 HHIPL1Q96JK4 782 aa20.28■□□□□ 0.84
CD40-207ENST00000620709 GMLQ99445 158 aa20.28■□□□□ 0.84
CD40-207ENST00000620709 SCAF8Q9UPN6 1271 aaKnown RBP20.28■□□□□ 0.84
CD40-207ENST00000620709 THSD7BQ9C0I4 1608 aa20.28■□□□□ 0.84
CD40-207ENST00000620709 PLIN1O60240 522 aa20.27■□□□□ 0.84
CD40-207ENST00000620709 CT47B1P0C2W7 299 aaPredicted RBP20.27■□□□□ 0.84
CD40-207ENST00000620709 DACT2Q5SW24 774 aa20.27■□□□□ 0.84
CD40-207ENST00000620709 OGFOD1Q8N543 542 aa20.27■□□□□ 0.84
CD40-207ENST00000620709 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
CD40-207ENST00000620709 SNAP23O00161 211 aa20.27■□□□□ 0.83
CD40-207ENST00000620709 CCDC57Q2TAC2 916 aa20.27■□□□□ 0.83
CD40-207ENST00000620709 EPHA10Q5JZY3 1008 aa20.27■□□□□ 0.83
CD40-207ENST00000620709 STRIP1Q5VSL9 837 aa20.27■□□□□ 0.83
CD40-207ENST00000620709 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.83
CD40-207ENST00000620709 ZNF594Q96JF6 807 aaPredicted RBP20.27■□□□□ 0.83
CD40-207ENST00000620709 SRCIN1Q9C0H9 1055 aa20.27■□□□□ 0.83
CD40-207ENST00000620709 GTF2IP78347 998 aa20.26■□□□□ 0.83
CD40-207ENST00000620709 CNNM1Q9NRU3 951 aa20.26■□□□□ 0.83
CD40-207ENST00000620709 ZNF609O15014 1411 aa20.25■□□□□ 0.83
CD40-207ENST00000620709 ZNF157P51786 506 aaPredicted RBP20.25■□□□□ 0.83
CD40-207ENST00000620709 NBPF9Q3BBW0 867 aa20.25■□□□□ 0.83
CD40-207ENST00000620709 ERICH6BQ5W0A0 696 aa20.25■□□□□ 0.83
CD40-207ENST00000620709 RGMBQ6NW40 437 aa20.25■□□□□ 0.83
CD40-207ENST00000620709 MYO3BQ8WXR4 1341 aa20.24■□□□□ 0.83
CD40-207ENST00000620709 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
CD40-207ENST00000620709 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
CD40-207ENST00000620709 NOGQ13253 232 aa20.24■□□□□ 0.83
CD40-207ENST00000620709 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
CD40-207ENST00000620709 KIAA0825Q8IV33 1275 aa20.24■□□□□ 0.83
CD40-207ENST00000620709 ZIC5Q96T25 663 aa20.24■□□□□ 0.83
CD40-207ENST00000620709 BRPF1P55201 1214 aaPredicted RBP20.23■□□□□ 0.83
CD40-207ENST00000620709 SASH1O94885 1247 aa20.22■□□□□ 0.83
CD40-207ENST00000620709 PRAMEF18Q5VWM3 479 aa20.22■□□□□ 0.83
CD40-207ENST00000620709 MRPL50Q8N5N7 158 aaKnown RBP20.22■□□□□ 0.83
CD40-207ENST00000620709 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.22■□□□□ 0.83
CD40-207ENST00000620709 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
CD40-207ENST00000620709 HDAC9Q9UKV0 1011 aa20.22■□□□□ 0.83
CD40-207ENST00000620709 SUCLG2Q96I99 432 aa20.22■□□□□ 0.83
CD40-207ENST00000620709 PITPNM2Q9BZ72 1349 aa20.21■□□□□ 0.83
CD40-207ENST00000620709 TTLL12Q14166 644 aaPredicted RBP20.21■□□□□ 0.83
CD40-207ENST00000620709 ZNF804AQ7Z570 1209 aa20.21■□□□□ 0.83
CD40-207ENST00000620709 CCDC102AQ96A19 550 aa20.21■□□□□ 0.83
CD40-207ENST00000620709 JAG2Q9Y219 1238 aa20.21■□□□□ 0.83
CD40-207ENST00000620709 KIF23Q02241 960 aaPredicted RBP20.2■□□□□ 0.82
CD40-207ENST00000620709 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
CD40-207ENST00000620709 FAM155AB1AL88 458 aaPredicted RBP20.19■□□□□ 0.82
CD40-207ENST00000620709 F8W031 263 aaPredicted RBP20.19■□□□□ 0.82
CD40-207ENST00000620709 WNT10BO00744 389 aa20.19■□□□□ 0.82
CD40-207ENST00000620709 CA12O43570 354 aa20.19■□□□□ 0.82
CD40-207ENST00000620709 NBPF7P0C2Y1 421 aaPredicted RBP20.19■□□□□ 0.82
CD40-207ENST00000620709 A0A1B0GUL6 1792 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms