RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
HNF4A-209ENST00000619550 USO1O60763 962 aaKnown RBP12.56□□□□□ -0.4
HNF4A-209ENST00000619550 GOLGA5Q8TBA6 731 aa12.56□□□□□ -0.4
HNF4A-209ENST00000619550 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
HNF4A-209ENST00000619550 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
HNF4A-209ENST00000619550 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
HNF4A-209ENST00000619550 IMPACTQ9P2X3 320 aa12.56□□□□□ -0.4
HNF4A-209ENST00000619550 MAP3K5Q99683 1374 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
HNF4A-209ENST00000619550 HOXC9P31274 260 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 CKAP4Q07065 602 aaKnown RBP12.55□□□□□ -0.4
HNF4A-209ENST00000619550 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
HNF4A-209ENST00000619550 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 LINS1Q8NG48 757 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 OPA1O60313 960 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 LRCH2Q5VUJ6 765 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 B4GALNT4Q76KP1 1039 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 EYA1Q99502 592 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.55□□□□□ -0.4
HNF4A-209ENST00000619550 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 ATP8B1O43520 1251 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
HNF4A-209ENST00000619550 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 SETSIPP0DME0 302 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
HNF4A-209ENST00000619550 NLRP3Q96P20 1036 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 SETDB2Q96T68 719 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 ELP1O95163 1332 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 CTAGE9A4FU28 777 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
HNF4A-209ENST00000619550 BAG3O95817 575 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
HNF4A-209ENST00000619550 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 XAGE3Q8WTP9 111 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 FAM160A1Q05DH4 1040 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
HNF4A-209ENST00000619550 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 AOX1Q06278 1338 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
HNF4A-209ENST00000619550 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 KRT18P05783 430 aaKnown RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 HOXB7P09629 217 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 Q6ZUG5 572 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 CTAGE1Q96RT6 745 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 FBLN1P23142 703 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 PPP2R3AQ06190 1150 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 GRM8O00222 908 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 SPTLC2O15270 562 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
HNF4A-209ENST00000619550 NAA15Q9BXJ9 866 aaKnown RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
HNF4A-209ENST00000619550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■■□□ 17.5
HNF4A-209ENST00000619550 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.4
HNF4A-209ENST00000619550 MBD5Q9P267 1494 aa12.52□□□□□ -0.4
HNF4A-209ENST00000619550 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.4
HNF4A-209ENST00000619550 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.4
HNF4A-209ENST00000619550 ZNF444Q8N0Y2 327 aaPredicted RBP12.52□□□□□ -0.4
HNF4A-209ENST00000619550 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.4
HNF4A-209ENST00000619550 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.4
HNF4A-209ENST00000619550 PYCARDQ9ULZ3 195 aa12.52□□□□□ -0.4
HNF4A-209ENST00000619550 RAD50Q92878 1312 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 ZNF213O14771 459 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 CARD6Q9BX69 1037 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 ANKRD18AQ8IVF6 992 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 SGSM2O43147 1006 aa12.52□□□□□ -0.41
HNF4A-209ENST00000619550 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
HNF4A-209ENST00000619550 LEO1Q8WVC0 666 aaPredicted RBP12.52□□□□□ -0.41
HNF4A-209ENST00000619550 HSF2BPO75031 334 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 TPTE2Q6XPS3 522 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 TAX1BP1Q86VP1 789 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.414e-6■■□□□ 12.8
HNF4A-209ENST00000619550 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 N4BP3O15049 544 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 NMIQ13287 307 aaPredicted RBP12.51□□□□□ -0.41
HNF4A-209ENST00000619550 TEX2Q8IWB9 1127 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 SSH2Q76I76 1423 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 PHACTR2O75167 634 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 CCDC172P0C7W6 258 aa12.51□□□□□ -0.41
HNF4A-209ENST00000619550 CPA1P15085 419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms