RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ERICH6Q7L0X2 663 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 IL17REQ8NFR9 667 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 TMEM134Q9H6X4 195 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 ITGBL1O95965 494 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-215ENST00000619322 ST5P78524 1137 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 GUCA2AQ02747 115 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 CALD1Q05682 793 aaKnown RBP7.19□□□□□ -1.26
CBWD3-215ENST00000619322 NUTM2GQ5VZR2 741 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 MORC1Q86VD1 984 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 RFX7Q2KHR2 1363 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 PPP2R1AP30153 589 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 PUS10Q3MIT2 529 aaKnown RBP7.19□□□□□ -1.26
CBWD3-215ENST00000619322 GIGYF2Q6Y7W6 1299 aaKnown RBP7.19□□□□□ -1.26
CBWD3-215ENST00000619322 MYH7P12883 1935 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 CHL1O00533 1208 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 BBOX1O75936 387 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 VEGFAP15692 232 aaPredicted RBP7.18□□□□□ -1.26
CBWD3-215ENST00000619322 RFC4P35249 363 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 EIF4A1P60842 406 aaKnown RBP7.18□□□□□ -1.26
CBWD3-215ENST00000619322 PKN2Q16513 984 aaKnown RBP7.18□□□□□ -1.26
CBWD3-215ENST00000619322 PACS2Q86VP3 889 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 NUDCQ9Y266 331 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
CBWD3-215ENST00000619322 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 WNT2BQ93097 391 aa7.18□□□□□ -1.26
CBWD3-215ENST00000619322 TK2O00142 265 aa7.17□□□□□ -1.26
CBWD3-215ENST00000619322 SERPINB2P05120 415 aa7.17□□□□□ -1.26
CBWD3-215ENST00000619322 TAF7Q15545 349 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-215ENST00000619322 ROBO3Q96MS0 1386 aa7.17□□□□□ -1.26
CBWD3-215ENST00000619322 RBM27Q9P2N5 1060 aaKnown RBP7.17□□□□□ -1.26
CBWD3-215ENST00000619322 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
CBWD3-215ENST00000619322 SLC4A5Q9BY07 1137 aa7.17□□□□□ -1.26
CBWD3-215ENST00000619322 ATP6V0A2Q9Y487 856 aa7.17□□□□□ -1.26
CBWD3-215ENST00000619322 IFT57Q9NWB7 429 aa7.16□□□□□ -1.26
CBWD3-215ENST00000619322 H0YIN7 160 aa7.16□□□□□ -1.26
CBWD3-215ENST00000619322 ACSBG1Q96GR2 724 aa7.16□□□□□ -1.26
CBWD3-215ENST00000619322 LAMA4Q16363 1823 aa7.16□□□□□ -1.26
CBWD3-215ENST00000619322 CT47B1P0C2W7 299 aaPredicted RBP7.16□□□□□ -1.26
CBWD3-215ENST00000619322 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
CBWD3-215ENST00000619322 SUGT1Q9Y2Z0 365 aa7.16□□□□□ -1.26
CBWD3-215ENST00000619322 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
CBWD3-215ENST00000619322 TMUB1Q9BVT8 246 aa7.15□□□□□ -1.26
CBWD3-215ENST00000619322 TBC1D2Q9BYX2 928 aa7.15□□□□□ -1.26
CBWD3-215ENST00000619322 KIAA2012Q0VF49 1180 aa7.15□□□□□ -1.27
CBWD3-215ENST00000619322 NEUROD2Q15784 382 aa7.15□□□□□ -1.27
CBWD3-215ENST00000619322 AGBL3Q8NEM8 1001 aa7.15□□□□□ -1.27
CBWD3-215ENST00000619322 KDM4CQ9H3R0 1056 aa7.15□□□□□ -1.27
CBWD3-215ENST00000619322 C9orf131Q5VYM1 1079 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 NBPF3Q9H094 633 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 ZPR1O75312 459 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 GPR162Q16538 588 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 FAM182BQ5T319 152 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 TICAM2Q86XR7 235 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 GMLQ99445 158 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 TAOK3Q9H2K8 898 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 TAF1DQ9H5J8 278 aaPredicted RBP7.14□□□□□ -1.27
CBWD3-215ENST00000619322 MYPNQ86TC9 1320 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 IARSP41252 1262 aaKnown RBP7.14□□□□□ -1.27
CBWD3-215ENST00000619322 CTCFP49711 727 aaPredicted RBP7.14□□□□□ -1.27
CBWD3-215ENST00000619322 MAP2K1Q02750 393 aaPredicted RBP7.14□□□□□ -1.27
CBWD3-215ENST00000619322 IL27Q8NEV9 243 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 RNF166Q96A37 237 aaPredicted RBP7.14□□□□□ -1.27
CBWD3-215ENST00000619322 RBM17Q96I25 401 aaKnown RBP7.14□□□□□ -1.27
CBWD3-215ENST00000619322 HPS5Q9UPZ3 1129 aa7.14□□□□□ -1.27
CBWD3-215ENST00000619322 ZNF521Q96K83 1311 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 GNRH1P01148 92 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 FKBP1CQ5VVH2 108 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 DDX21Q9NR30 783 aaKnown RBP eCLIP7.13□□□□□ -1.27
CBWD3-215ENST00000619322 SLC45A1Q9Y2W3 748 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 NAV1Q8NEY1 1877 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 ECE1P42892 770 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 HDLBPQ00341 1268 aaKnown RBP7.13□□□□□ -1.27
CBWD3-215ENST00000619322 FUT2Q10981 343 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 AMHR2Q16671 573 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 SULT6B1Q6IMI4 303 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 SYMPKQ92797 1274 aaKnown RBP7.13□□□□□ -1.27
CBWD3-215ENST00000619322 FAM217BQ9NTX9 383 aaPredicted RBP7.13□□□□□ -1.27
CBWD3-215ENST00000619322 ZBTB1Q9Y2K1 713 aa7.13□□□□□ -1.27
CBWD3-215ENST00000619322 DNAJB2P25686 324 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 PPP1R42Q7Z4L9 355 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 PLBD2Q8NHP8 589 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 DDX54Q8TDD1 881 aaKnown RBP7.12□□□□□ -1.27
CBWD3-215ENST00000619322 ADARB2Q9NS39 739 aaKnown RBP7.12□□□□□ -1.27
CBWD3-215ENST00000619322 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 ALPK3Q96L96 1907 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 A0A1W2PPC1 479 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 PRMT2P55345 433 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 DNAJC10Q8IXB1 793 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 MAF1Q9H063 256 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 ZNF804BA4D1E1 1349 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 SALL1Q9NSC2 1324 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 TBC1D9BQ66K14 1250 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
CBWD3-215ENST00000619322 FAM43BQ6ZT52 329 aaPredicted RBP7.12□□□□□ -1.27
CBWD3-215ENST00000619322 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
CBWD3-215ENST00000619322 SUPT16HQ9Y5B9 1047 aaKnown RBP7.12□□□□□ -1.27
CBWD3-215ENST00000619322 EIF5BO60841 1220 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms