RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ATP5JP18859 108 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 F8W031 263 aaPredicted RBP16.16■□□□□ 0.18
CIITA-213ENST00000618327 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 CCDC70Q6NSX1 233 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 CCDC129Q6ZRS4 1044 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 KAT14Q9H8E8 782 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
CIITA-213ENST00000618327 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
CIITA-213ENST00000618327 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 ZBTB43O43298 467 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 PRC1O43663 620 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 KIF5BP33176 963 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 COPRSQ9NQ92 184 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 APBA3O96018 575 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 HIBADHP31937 336 aaKnown RBP16.15■□□□□ 0.18
CIITA-213ENST00000618327 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 SYCE3A1L190 88 aa16.15■□□□□ 0.18
CIITA-213ENST00000618327 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
CIITA-213ENST00000618327 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
CIITA-213ENST00000618327 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
CIITA-213ENST00000618327 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 APPBP2Q92624 585 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 BRPF3Q9ULD4 1205 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 JAG2Q9Y219 1238 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 FER1L4A9Z1Z3 1794 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
CIITA-213ENST00000618327 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
CIITA-213ENST00000618327 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 CCDC96Q2M329 555 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
CIITA-213ENST00000618327 STK32BQ9NY57 414 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 MBD4O95243 580 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
CIITA-213ENST00000618327 CCDC39Q9UFE4 941 aa16.13■□□□□ 0.17
CIITA-213ENST00000618327 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
CIITA-213ENST00000618327 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
CIITA-213ENST00000618327 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
CIITA-213ENST00000618327 UFL1O94874 794 aa16.13■□□□□ 0.17
CIITA-213ENST00000618327 LRRC24Q50LG9 513 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 EYA3Q99504 573 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 SMC2O95347 1197 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 KRT18P05783 430 aaKnown RBP16.12■□□□□ 0.17
CIITA-213ENST00000618327 NLRP5P59047 1200 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 CAMK4Q16566 473 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 IFIT1BQ5T764 474 aaKnown RBP16.12■□□□□ 0.17
CIITA-213ENST00000618327 CPA1P15085 419 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 ZAP70P43403 619 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
CIITA-213ENST00000618327 SLC27A2O14975 620 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
CIITA-213ENST00000618327 MCM9Q9NXL9 1143 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
CIITA-213ENST00000618327 PLCG2P16885 1265 aa16.11■□□□□ 0.17
CIITA-213ENST00000618327 CCDC183Q5T5S1 534 aa16.11■□□□□ 0.17
CIITA-213ENST00000618327 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
CIITA-213ENST00000618327 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
CIITA-213ENST00000618327 DACH1Q9UI36 760 aa16.11■□□□□ 0.17
CIITA-213ENST00000618327 SNX14Q9Y5W7 946 aa16.11■□□□□ 0.17
CIITA-213ENST00000618327 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
CIITA-213ENST00000618327 INTS4Q96HW7 963 aaKnown RBP16.11■□□□□ 0.17
CIITA-213ENST00000618327 GPAA1O43292 621 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
CIITA-213ENST00000618327 APOBRQ0VD83 1088 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 RTN1Q16799 776 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 GREM2Q9H772 168 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 ARGLU1Q9NWB6 273 aaPredicted RBP16.1■□□□□ 0.17
CIITA-213ENST00000618327 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 GGA1Q9UJY5 639 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 CCDC194A0A1B0GVG4 234 aa16.1■□□□□ 0.17
CIITA-213ENST00000618327 ARHGEF28Q8N1W1 1705 aaKnown RBP16.09■□□□□ 0.17
CIITA-213ENST00000618327 PICALMQ13492 652 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 CABP5Q9NP86 173 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 OGFOD1Q8N543 542 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 ZNF76P36508 570 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 PDILTQ8N807 584 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
CIITA-213ENST00000618327 POLD1P28340 1107 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 FILIP1LQ4L180 1135 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 USP32Q8NFA0 1604 aa16.09■□□□□ 0.17
CIITA-213ENST00000618327 CRB1P82279 1406 aa16.08■□□□□ 0.17
CIITA-213ENST00000618327 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.17
CIITA-213ENST00000618327 MNS1Q8NEH6 495 aa16.08■□□□□ 0.17
CIITA-213ENST00000618327 ARMT1Q9H993 441 aa16.08■□□□□ 0.17
CIITA-213ENST00000618327 ATG3Q9NT62 314 aa16.08■□□□□ 0.17
CIITA-213ENST00000618327 RPS6KB1P23443 525 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms