RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SNAP23O00161 211 aa31.17■■■□□ 2.58
PMS1-220ENST00000618056 GNAI3P08754 354 aa31.17■■■□□ 2.58
PMS1-220ENST00000618056 MROH5Q6ZUA9 1318 aa31.17■■■□□ 2.58
PMS1-220ENST00000618056 USP17L3A6NCW0 530 aa31.16■■■□□ 2.58
PMS1-220ENST00000618056 USP17L4A6NCW7 530 aa31.16■■■□□ 2.58
PMS1-220ENST00000618056 H7C1D1 291 aa31.16■■■□□ 2.58
PMS1-220ENST00000618056 RFX5P48382 616 aaPredicted RBP31.16■■■□□ 2.58
PMS1-220ENST00000618056 USP17L1Q7RTZ2 530 aa31.16■■■□□ 2.58
PMS1-220ENST00000618056 MICALL2Q8IY33 904 aa31.16■■■□□ 2.58
PMS1-220ENST00000618056 CLUAP1Q96AJ1 413 aa31.16■■■□□ 2.58
PMS1-220ENST00000618056 LRRFIP2Q9Y608 721 aaKnown RBP31.16■■■□□ 2.58
PMS1-220ENST00000618056 ITGBL1O95965 494 aaPredicted RBP31.15■■■□□ 2.58
PMS1-220ENST00000618056 RSBN1LQ6PCB5 846 aaPredicted RBP31.15■■■□□ 2.58
PMS1-220ENST00000618056 AGBL3Q8NEM8 1001 aa31.15■■■□□ 2.58
PMS1-220ENST00000618056 PASKQ96RG2 1323 aa31.15■■■□□ 2.58
PMS1-220ENST00000618056 SHTN1A0MZ66 631 aa31.14■■■□□ 2.57
PMS1-220ENST00000618056 PLIN1O60240 522 aa31.14■■■□□ 2.57
PMS1-220ENST00000618056 UBE4AQ14139 1066 aa31.14■■■□□ 2.57
PMS1-220ENST00000618056 LRRC24Q50LG9 513 aa31.14■■■□□ 2.57
PMS1-220ENST00000618056 KLHDC4Q8TBB5 520 aa31.14■■■□□ 2.57
PMS1-220ENST00000618056 MAP1SQ66K74 1059 aaPredicted RBP31.13■■■□□ 2.57
PMS1-220ENST00000618056 CNTROBQ8N137 903 aa31.13■■■□□ 2.57
PMS1-220ENST00000618056 GMLQ99445 158 aa31.13■■■□□ 2.57
PMS1-220ENST00000618056 POLR2AP24928 1970 aaKnown RBP31.12■■■□□ 2.57
PMS1-220ENST00000618056 PTPN12Q05209 780 aaKnown RBP31.12■■■□□ 2.57
PMS1-220ENST00000618056 STRIP1Q5VSL9 837 aa31.12■■■□□ 2.57
PMS1-220ENST00000618056 CD209Q9NNX6 404 aa31.12■■■□□ 2.57
PMS1-220ENST00000618056 TMEM57Q8N5G2 664 aa31.11■■■□□ 2.57
PMS1-220ENST00000618056 TRPM4Q8TD43 1214 aa31.11■■■□□ 2.57
PMS1-220ENST00000618056 ZC3H15Q8WU90 426 aaKnown RBP31.11■■■□□ 2.57
PMS1-220ENST00000618056 PGAP2Q9UHJ9 254 aa31.11■■■□□ 2.57
PMS1-220ENST00000618056 HIRAP54198 1017 aaPredicted RBP31.1■■■□□ 2.57
PMS1-220ENST00000618056 DACT2Q5SW24 774 aa31.1■■■□□ 2.57
PMS1-220ENST00000618056 ZNF804AQ7Z570 1209 aa31.1■■■□□ 2.57
PMS1-220ENST00000618056 TRPM7Q96QT4 1865 aa31.09■■■□□ 2.57
PMS1-220ENST00000618056 METTL24Q5JXM2 366 aa31.09■■■□□ 2.57
PMS1-220ENST00000618056 VGLL2Q8N8G2 317 aa31.09■■■□□ 2.57
PMS1-220ENST00000618056 FBXO3Q9UK99 471 aa31.09■■■□□ 2.57
PMS1-220ENST00000618056 EYA2O00167 538 aa31.08■■■□□ 2.57
PMS1-220ENST00000618056 FTSJ3Q8IY81 847 aaKnown RBP31.08■■■□□ 2.57
PMS1-220ENST00000618056 DZIP1LQ8IYY4 767 aaKnown RBP31.08■■■□□ 2.57
PMS1-220ENST00000618056 MYO3BQ8WXR4 1341 aa31.08■■■□□ 2.57
PMS1-220ENST00000618056 PDE8BO95263 885 aa31.08■■■□□ 2.57
PMS1-220ENST00000618056 IL1R1P14778 569 aa31.08■■■□□ 2.57
PMS1-220ENST00000618056 ZNF280AP59817 542 aaPredicted RBP31.08■■■□□ 2.57
PMS1-220ENST00000618056 MTX1Q13505 466 aa31.08■■■□□ 2.57
PMS1-220ENST00000618056 SAMD7Q7Z3H4 446 aa31.08■■■□□ 2.57
PMS1-220ENST00000618056 HTRA3P83110 453 aa31.07■■■□□ 2.56
PMS1-220ENST00000618056 TTLL5Q6EMB2 1281 aa31.07■■■□□ 2.56
PMS1-220ENST00000618056 DNAJC5GQ8N7S2 189 aa31.07■■■□□ 2.56
PMS1-220ENST00000618056 EGFRP00533 1210 aa31.05■■■□□ 2.56
PMS1-220ENST00000618056 GNAI2P04899 355 aa31.05■■■□□ 2.56
PMS1-220ENST00000618056 USP17L8P0C7I0 530 aa31.05■■■□□ 2.56
PMS1-220ENST00000618056 TBC1D10BQ4KMP7 808 aaPredicted RBP31.05■■■□□ 2.56
PMS1-220ENST00000618056 ATG9AQ7Z3C6 839 aa31.05■■■□□ 2.56
PMS1-220ENST00000618056 CIAO1O76071 339 aa31.04■■■□□ 2.56
PMS1-220ENST00000618056 RLBP1P12271 317 aa31.04■■■□□ 2.56
PMS1-220ENST00000618056 FBXW7Q969H0 707 aa31.04■■■□□ 2.56
PMS1-220ENST00000618056 COPRSQ9NQ92 184 aa31.04■■■□□ 2.56
PMS1-220ENST00000618056 CREBZFQ9NS37 354 aa31.04■■■□□ 2.56
PMS1-220ENST00000618056 GTF2IP78347 998 aa31.03■■■□□ 2.56
PMS1-220ENST00000618056 PCNTO95613 3336 aa31.03■■■□□ 2.56
PMS1-220ENST00000618056 MMP14P50281 582 aa31.02■■■□□ 2.56
PMS1-220ENST00000618056 KIF4BQ2VIQ3 1234 aa31.02■■■□□ 2.56
PMS1-220ENST00000618056 FAM84BQ96KN1 310 aaPredicted RBP31.02■■■□□ 2.56
PMS1-220ENST00000618056 MXD3Q9BW11 206 aa31.02■■■□□ 2.56
PMS1-220ENST00000618056 HIBADHP31937 336 aaKnown RBP31.01■■■□□ 2.56
PMS1-220ENST00000618056 SRGAP3O43295 1099 aa31.01■■■□□ 2.55
PMS1-220ENST00000618056 GYG1P46976 350 aa31.01■■■□□ 2.55
PMS1-220ENST00000618056 PUM3Q15397 648 aaKnown RBP31.01■■■□□ 2.55
PMS1-220ENST00000618056 TDRD7Q8NHU6 1098 aaKnown RBP31.01■■■□□ 2.55
PMS1-220ENST00000618056 RCAN3Q9UKA8 241 aa31.01■■■□□ 2.55
PMS1-220ENST00000618056 SASH1O94885 1247 aa31■■■□□ 2.55
PMS1-220ENST00000618056 FGFR2P21802 821 aa31■■■□□ 2.55
PMS1-220ENST00000618056 RBM26Q5T8P6 1007 aaKnown RBP31■■■□□ 2.55
PMS1-220ENST00000618056 SIL1Q9H173 461 aa31■■■□□ 2.55
PMS1-220ENST00000618056 MYOZ2Q9NPC6 264 aa31■■■□□ 2.55
PMS1-220ENST00000618056 TMEM88BA6NKF7 163 aa30.99■■■□□ 2.55
PMS1-220ENST00000618056 IL15P40933 162 aaPredicted RBP30.99■■■□□ 2.55
PMS1-220ENST00000618056 FKBP1AP62942 108 aaKnown RBP30.99■■■□□ 2.55
PMS1-220ENST00000618056 FBXO33Q7Z6M2 555 aa30.99■■■□□ 2.55
PMS1-220ENST00000618056 ITPRIPQ8IWB1 547 aa30.99■■■□□ 2.55
PMS1-220ENST00000618056 PA2G4Q9UQ80 394 aaKnown RBP30.99■■■□□ 2.55
PMS1-220ENST00000618056 MS4A1P11836 297 aa30.98■■■□□ 2.55
PMS1-220ENST00000618056 CDC37L1Q7L3B6 337 aa30.98■■■□□ 2.55
PMS1-220ENST00000618056 OGFOD1Q8N543 542 aa30.98■■■□□ 2.55
PMS1-220ENST00000618056 KLRG1Q96E93 195 aa30.98■■■□□ 2.55
PMS1-220ENST00000618056 FAM205AQ6ZU69 1335 aa30.98■■■□□ 2.55
PMS1-220ENST00000618056 ARAP2Q8WZ64 1704 aa30.97■■■□□ 2.55
PMS1-220ENST00000618056 MYH13Q9UKX3 1938 aa30.97■■■□□ 2.55
PMS1-220ENST00000618056 GLIS2Q9BZE0 524 aaPredicted RBP30.97■■■□□ 2.55
PMS1-220ENST00000618056 ZBTB7BO15156 539 aaPredicted RBP30.96■■■□□ 2.55
PMS1-220ENST00000618056 IFIT1P09914 478 aaKnown RBP30.96■■■□□ 2.55
PMS1-220ENST00000618056 CAVIN4Q5BKX8 364 aa30.96■■■□□ 2.55
PMS1-220ENST00000618056 CERS5Q8N5B7 392 aa30.96■■■□□ 2.55
PMS1-220ENST00000618056 CEP126Q9P2H0 1117 aa30.96■■■□□ 2.55
PMS1-220ENST00000618056 TRAF5O00463 557 aa30.95■■■□□ 2.55
PMS1-220ENST00000618056 LPIN2Q92539 896 aa30.95■■■□□ 2.55
PMS1-220ENST00000618056 VPS37DQ86XT2 251 aa30.95■■■□□ 2.54
PMS1-220ENST00000618056 PANK1Q8TE04 598 aa30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms