RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
GPC6-202ENST00000617456 DBF4Q9UBU7 674 aaPredicted RBP11.01□□□□□ -0.65
GPC6-202ENST00000617456 ZNF853P0CG23 659 aa11□□□□□ -0.65
GPC6-202ENST00000617456 CCDC152Q4G0S7 254 aa11□□□□□ -0.65
GPC6-202ENST00000617456 ZBTB38Q8NAP3 1195 aaPredicted RBP11□□□□□ -0.65
GPC6-202ENST00000617456 FBXW7Q969H0 707 aa11□□□□□ -0.65
GPC6-202ENST00000617456 HYPKQ9NX55 129 aa11□□□□□ -0.65
GPC6-202ENST00000617456 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
GPC6-202ENST00000617456 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
GPC6-202ENST00000617456 PAPPA2Q9BXP8 1791 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 GNAI1P63096 354 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 TRIM28Q13263 835 aaKnown RBP10.99□□□□□ -0.65
GPC6-202ENST00000617456 PRKG1Q13976 671 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 NBPF9Q3BBW0 867 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 DUSP27Q5VZP5 1158 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 USP17L1Q7RTZ2 530 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 GMLQ99445 158 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 MYD88Q99836 296 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 IFT57Q9NWB7 429 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 PITPNM2Q9BZ72 1349 aa10.99□□□□□ -0.65
GPC6-202ENST00000617456 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
GPC6-202ENST00000617456 GPR25O00155 361 aa10.98□□□□□ -0.65
GPC6-202ENST00000617456 HSP90B1P14625 803 aaKnown RBP10.98□□□□□ -0.65
GPC6-202ENST00000617456 ATP2B4P23634 1241 aa10.98□□□□□ -0.65
GPC6-202ENST00000617456 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
GPC6-202ENST00000617456 ANKRD18AQ8IVF6 992 aa10.98□□□□□ -0.65
GPC6-202ENST00000617456 PHAXQ9H814 394 aaKnown RBP10.98□□□□□ -0.65
GPC6-202ENST00000617456 XDHP47989 1333 aa10.98□□□□□ -0.65
GPC6-202ENST00000617456 ELL2O00472 640 aaPredicted RBP10.97□□□□□ -0.65
GPC6-202ENST00000617456 PDE8AO60658 829 aa10.97□□□□□ -0.65
GPC6-202ENST00000617456 FKTNO75072 461 aa10.97□□□□□ -0.65
GPC6-202ENST00000617456 PCCAP05165 728 aaPredicted RBP10.97□□□□□ -0.65
GPC6-202ENST00000617456 NF2P35240 595 aa10.97□□□□□ -0.65
GPC6-202ENST00000617456 TM4SF4P48230 202 aa10.97□□□□□ -0.65
GPC6-202ENST00000617456 FBXO46Q6PJ61 603 aaPredicted RBP10.97□□□□□ -0.65
GPC6-202ENST00000617456 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
GPC6-202ENST00000617456 ZNF609O15014 1411 aa10.96□□□□□ -0.65
GPC6-202ENST00000617456 SASH1O94885 1247 aa10.96□□□□□ -0.65
GPC6-202ENST00000617456 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
GPC6-202ENST00000617456 SREBF2Q12772 1141 aa10.96□□□□□ -0.65
GPC6-202ENST00000617456 PODNQ7Z5L7 613 aa10.96□□□□□ -0.65
GPC6-202ENST00000617456 OGFOD1Q8N543 542 aa10.96□□□□□ -0.65
GPC6-202ENST00000617456 CWC25Q9NXE8 425 aaPredicted RBP10.96□□□□□ -0.65
GPC6-202ENST00000617456 WNT10BO00744 389 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 APAF1O14727 1248 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 ARMC9Q7Z3E5 817 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 CCDC191Q8NCU4 936 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 FZD1Q9UP38 647 aa10.95□□□□□ -0.66
GPC6-202ENST00000617456 CTSWP56202 376 aa10.94□□□□□ -0.66
GPC6-202ENST00000617456 CDC5LQ99459 802 aaKnown RBP10.94□□□□□ -0.66
GPC6-202ENST00000617456 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
GPC6-202ENST00000617456 ANGEL1Q9UNK9 670 aaKnown RBP10.94□□□□□ -0.66
GPC6-202ENST00000617456 MINPP1Q9UNW1 487 aa10.94□□□□□ -0.66
GPC6-202ENST00000617456 IL16Q14005 1332 aa10.93□□□□□ -0.66
GPC6-202ENST00000617456 CCT4P50991 539 aaKnown RBP10.93□□□□□ -0.66
GPC6-202ENST00000617456 NOM1Q5C9Z4 860 aaKnown RBP10.93□□□□□ -0.66
GPC6-202ENST00000617456 SPRYD7Q5W111 196 aa10.93□□□□□ -0.66
GPC6-202ENST00000617456 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
GPC6-202ENST00000617456 GCC1Q96CN9 775 aa10.93□□□□□ -0.66
GPC6-202ENST00000617456 METTL22Q9BUU2 404 aaPredicted RBP10.93□□□□□ -0.66
GPC6-202ENST00000617456 GREM2Q9H772 168 aa10.93□□□□□ -0.66
GPC6-202ENST00000617456 TRIM17Q9Y577 477 aa10.93□□□□□ -0.66
GPC6-202ENST00000617456 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
GPC6-202ENST00000617456 MED23Q9ULK4 1368 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 BRD2P25440 801 aaKnown RBP10.92□□□□□ -0.66
GPC6-202ENST00000617456 GLIPR1L2Q4G1C9 344 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 STRIP1Q5VSL9 837 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 CCDC30Q5VVM6 783 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 TTLL5Q6EMB2 1281 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 TXNRD3Q86VQ6 643 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 APOBEC3FQ8IUX4 373 aaKnown RBP10.92□□□□□ -0.66
GPC6-202ENST00000617456 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 BSDC1Q9NW68 430 aaPredicted RBP10.92□□□□□ -0.66
GPC6-202ENST00000617456 MAP3K2Q9Y2U5 619 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 PSME4Q14997 1843 aa10.92□□□□□ -0.66
GPC6-202ENST00000617456 MYO3BQ8WXR4 1341 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
GPC6-202ENST00000617456 DDX58O95786 925 aaKnown RBP10.91□□□□□ -0.66
GPC6-202ENST00000617456 ALDH1A1P00352 501 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 KLRK1P26718 216 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 GTF2IP78347 998 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 AAMPQ13685 434 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 HABP4Q5JVS0 413 aaKnown RBP10.91□□□□□ -0.66
GPC6-202ENST00000617456 LDLRAD1Q5T700 205 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 OTOP1Q7RTM1 612 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 IFNL1Q8IU54 200 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 TTLL11Q8NHH1 800 aa10.91□□□□□ -0.66
GPC6-202ENST00000617456 MANSC4A6NHS7 340 aaPredicted RBP10.9□□□□□ -0.66
GPC6-202ENST00000617456 ANP32CO43423 234 aa10.9□□□□□ -0.66
GPC6-202ENST00000617456 IGHMBP2P38935 993 aaKnown RBP10.9□□□□□ -0.66
GPC6-202ENST00000617456 C8orf58Q8NAV2 365 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms