RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 SCARF1Q14162 830 aa17.33■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
TNFRSF11A-206ENST00000617039 RPS6KB1P23443 525 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 RFC4P35249 363 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 METAP2P50579 478 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ANO6Q4KMQ2 910 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 LIG1P18858 919 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CCDC191Q8NCU4 936 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZNF165P49910 485 aa17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 DZIP1Q86YF9 867 aaKnown RBP17.32■□□□□ 0.36
TNFRSF11A-206ENST00000617039 AIFM3Q96NN9 605 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 NRDCO43847 1150 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PRKAB2O43741 272 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 UBE2HP62256 183 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZSCAN30Q86W11 494 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 GPIHBP1Q8IV16 184 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 NCOA7Q8NI08 942 aa17.31■□□□□ 0.36
TNFRSF11A-206ENST00000617039 GOLGB1Q14789 3259 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 C16orf45Q96MC5 204 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PLIN2Q99541 437 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PPLO60437 1756 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZNF532Q9HCE3 1301 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 MYOM1P52179 1685 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZNF622Q969S3 477 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CFAP45Q9UL16 551 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 FGAP02671 866 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 HSPD1P10809 573 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 MCM5P33992 734 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 POLA2Q14181 598 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 MFSD6Q6ZSS7 791 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZNF396Q96N95 335 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 STAP2Q9UGK3 403 aa17.3■□□□□ 0.36
TNFRSF11A-206ENST00000617039 BRD1O95696 1058 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CPLX3Q8WVH0 158 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PCMTD1Q96MG8 357 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 AK9Q5TCS8 1911 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 DIP2BQ9P265 1576 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CYP2D7A0A087X1C5 515 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SERPINC1P01008 464 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PICALMQ13492 652 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 LAMC1P11047 1609 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 E7EWF7 191 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 STAMQ92783 540 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
TNFRSF11A-206ENST00000617039 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 TPM4P67936 248 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 PDIA6Q15084 440 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SAP30BPQ9UHR5 308 aaKnown RBP17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 KCNJ14Q9UNX9 436 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 GLIPR1L2Q4G1C9 344 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
TNFRSF11A-206ENST00000617039 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZSCAN25Q6NSZ9 544 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 TTC6Q86TZ1 520 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 NOC3LQ8WTT2 800 aaKnown RBP17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 AK7Q96M32 723 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 DENND2AQ9ULE3 1009 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 FAM170AA1A519 330 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 M0R2C6 588 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ATP5JP18859 108 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 AATFQ9NY61 560 aaKnown RBP eCLIP17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
TNFRSF11A-206ENST00000617039 ERCC3P19447 782 aa17.27■□□□□ 0.35
TNFRSF11A-206ENST00000617039 AFMP43652 599 aa17.27■□□□□ 0.35
TNFRSF11A-206ENST00000617039 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.35
TNFRSF11A-206ENST00000617039 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MTMR6Q9Y217 621 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 SSBP05455 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 SIK1P57059 783 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CCDC102BQ68D86 513 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 NLRP3Q96P20 1036 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 ZHX3Q9H4I2 956 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 ATG3Q9NT62 314 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms