RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ZNF830Q96NB3 372 aaPredicted RBP14.26□□□□□ -0.13
TCF4-248ENST00000616053 MVPQ14764 893 aaKnown RBP14.26□□□□□ -0.13
TCF4-248ENST00000616053 NAA25Q14CX7 972 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 RTEL1Q9NZ71 1219 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 GOLIM4O00461 696 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 NAPAP54920 295 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 MAP3K11Q16584 847 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 FAM8A1Q9UBU6 413 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 NOX5Q96PH1 765 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 ANO10Q9NW15 660 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
TCF4-248ENST00000616053 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 DNAAF4Q8WXU2 420 aa14.26□□□□□ -0.13
TCF4-248ENST00000616053 RTCBQ9Y3I0 505 aaKnown RBP14.26□□□□□ -0.13
TCF4-248ENST00000616053 RYBPQ8N488 228 aaPredicted RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 SYNDIG1Q9H7V2 258 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 LRFN2Q9ULH4 789 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 ABT1Q9ULW3 272 aaKnown RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 SLC12A2P55011 1212 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 STAT6P42226 847 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 NOB1Q9ULX3 412 aaKnown RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 SETDB1Q15047 1291 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 SLC17A8Q8NDX2 589 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 PANK2Q9BZ23 570 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 AAMPQ13685 434 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 RBBP5Q15291 538 aaKnown RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 PRR16Q569H4 304 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 CASQ2O14958 399 aaPredicted RBP14.25□□□□□ -0.13
TCF4-248ENST00000616053 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
TCF4-248ENST00000616053 STMN1P16949 149 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 NOP14P78316 857 aaKnown RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 SDCCAG8Q86SQ7 713 aaPredicted RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 CHST3Q7LGC8 479 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 CSADQ9Y600 493 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 OCM2P0CE71 109 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 OCMP0CE72 109 aaPredicted RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 SMTNP53814 917 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 PALM2Q8IXS6 379 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 IPO4Q8TEX9 1081 aaKnown RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 POLR3GO15318 223 aaPredicted RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 ITKQ08881 620 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 IARSP41252 1262 aaKnown RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 NUCKS1Q9H1E3 243 aaKnown RBP14.24□□□□□ -0.13
TCF4-248ENST00000616053 SUFUQ9UMX1 484 aa14.24□□□□□ -0.13
TCF4-248ENST00000616053 RMND1Q9NWS8 449 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 NSFL1CQ9UNZ2 370 aaKnown RBP14.23□□□□□ -0.13
TCF4-248ENST00000616053 SCAPERQ9BY12 1400 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 HSPA4P34932 840 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 KIF11P52732 1056 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 PHLDB2Q86SQ0 1253 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 MICU3Q86XE3 530 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 PPFIA2O75334 1257 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 PTPDC1A2A3K4 754 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 H7C1D1 291 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
TCF4-248ENST00000616053 RPS6KA2Q15349 733 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 SLC26A6Q9BXS9 759 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 RTEL1-TNFRSF6BF6WH68 1400 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
TCF4-248ENST00000616053 OLA1Q9NTK5 396 aaKnown RBP14.23□□□□□ -0.13
TCF4-248ENST00000616053 HNRNPCL2B2RXH8 293 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 PFDN6O15212 129 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 HNRNPCL1O60812 293 aaKnown RBP14.22□□□□□ -0.13
TCF4-248ENST00000616053 RRS1Q15050 365 aaKnown RBP14.22□□□□□ -0.13
TCF4-248ENST00000616053 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 RBM28Q9NW13 759 aaKnown RBP14.22□□□□□ -0.13
TCF4-248ENST00000616053 CABP1Q9NZU7 370 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 AMOTQ4VCS5 1084 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 ARHGAP27Q6ZUM4 889 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 SELENOSQ9BQE4 189 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 CASC4Q6P4E1 433 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 KIFAP3Q92845 792 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 PLCG2P16885 1265 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 MAN1A1P33908 653 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
TCF4-248ENST00000616053 PTPN14Q15678 1187 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 FERMT3Q86UX7 667 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 FAM95CA0A1B0GW59 222 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 KRT19P08727 400 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 CYP7A1P22680 504 aa14.22□□□□□ -0.13
TCF4-248ENST00000616053 TRAK2O60296 914 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 MYCLP12524 364 aaPredicted RBP14.21□□□□□ -0.13
TCF4-248ENST00000616053 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
TCF4-248ENST00000616053 CCDC170Q8IYT3 715 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 LARGE2Q8N3Y3 721 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 ANKS4BQ8N8V4 417 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 GCNAQ96QF7 691 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 SEC62Q99442 399 aaKnown RBP14.21□□□□□ -0.13
TCF4-248ENST00000616053 BAG6P46379 1132 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms