RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CFAP157Q5JU67 520 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 A0A1B0GW55 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4L2P0CJ85 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4L3P0CJ86 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4L4P0CJ87 422 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4L5P0CJ88 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4L6P0CJ89 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4L7P0CJ90 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 HELBQ8NG08 1087 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 OPTNQ96CV9 577 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 YY1AP1Q9H869 796 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 DUX4Q9UBX2 424 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 CCDC96Q2M329 555 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 TEX2Q8IWB9 1127 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 KIAA1524Q8TCG1 905 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 SENP3Q9H4L4 574 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 RAD21O60216 631 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 CDKL5O76039 1030 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 CTAGE1Q96RT6 745 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 RIPOR2Q9Y4F9 1068 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 ZBTB41Q5SVQ8 909 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 SCAND2PQ9GZW5 306 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 DISP1Q96F81 1524 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 KLHL40Q2TBA0 621 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 AMOTQ4VCS5 1084 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 TBC1D10BQ4KMP7 808 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 DTNBP1Q96EV8 351 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 ZNF131P52739 623 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 ZSCAN25Q6NSZ9 544 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 DRC3Q9H069 523 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 IKQ13123 557 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 JAKMIP1Q96N16 626 aaKnown RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 NOL7Q9UMY1 257 aaKnown RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 KCNH5Q8NCM2 988 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 NUP88Q99567 741 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-211ENST00000615798 TSG101Q99816 390 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 PSME1Q06323 249 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
COL12A1-211ENST00000615798 CTAGE15A4D2H0 777 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 STX1AQ16623 288 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 ARHGEF2Q92974 986 aaKnown RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 CEP131Q9UPN4 1083 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 DYTNA2CJ06 578 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 DYNC1I2Q13409 638 aaKnown RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 MYO18AQ92614 2054 aaKnown RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 CTAGE8P0CG41 777 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 CTAGE4Q8IX94 777 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 VPS52Q8N1B4 723 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 KCNA4P22459 653 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 VAV2P52735 878 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 HAUS1Q96CS2 278 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 CENPKQ9BS16 269 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 NKIRAS1Q9NYS0 192 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 SYNMO15061 1565 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 PLCB4Q15147 1175 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 RASIP1Q5U651 963 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-211ENST00000615798 HMOX1P09601 288 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 CCDC102BQ68D86 513 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 PHEXP78562 749 aa10.48□□□□□ -0.73
COL12A1-211ENST00000615798 A2MP01023 1474 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 ATP6V1E1P36543 226 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 CTNNA3Q9UI47 895 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 STAG1Q8WVM7 1258 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 LMNAP02545 664 aaKnown RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 SLC3A2P08195 630 aaKnown RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 CCDC12Q8WUD4 166 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 MYO5CQ9NQX4 1742 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 KIAA0753Q2KHM9 967 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 GNG11P61952 73 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 KIF1BPQ96EK5 621 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 GOLGA4Q13439 2230 aaKnown RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 RASSF2P50749 326 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 NEK2P51955 445 aa10.47□□□□□ -0.73
COL12A1-211ENST00000615798 TTC12Q9H892 705 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL12A1-211ENST00000615798 RANBP1P43487 201 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 TNIP1Q15025 636 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 HDGFL1Q5TGJ6 251 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 CTTNBP2NLQ9P2B4 639 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 NOS1P29475 1434 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 NDUFAB1O14561 156 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 ATP2A1O14983 1001 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms