RNA–Protein interactions for RNA: ENST00000614008.4

TSPAN6-205, Transcript of tetraspanin 6, humanhuman

TSL 5 BASIC

Gene TSPAN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-205ENST00000614008 EYA3Q99504 573 aa8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 TSPYL2Q9H2G4 693 aaPredicted RBP8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 TAOK3Q9H2K8 898 aa8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 SEC31BQ9NQW1 1179 aa8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 BSDC1Q9NW68 430 aaPredicted RBP8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 PSME4Q14997 1843 aa8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 XDHP47989 1333 aa8.54□□□□□ -1.04
TSPAN6-205ENST00000614008 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 G3BP1Q13283 466 aaKnown RBP eCLIP8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 EPHA10Q5JZY3 1008 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 C20orf194Q5TEA3 1177 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 RPAP2Q8IXW5 612 aaPredicted RBP8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 LTBP1Q14766 1721 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 ARAP2Q8WZ64 1704 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 MROH5Q6ZUA9 1318 aa8.53□□□□□ -1.04
TSPAN6-205ENST00000614008 FKBP4Q02790 459 aaKnown RBP eCLIP8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 MTX1Q13505 466 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 GSE1Q14687 1217 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 METTL24Q5JXM2 366 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 ANKRD44Q8N8A2 993 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 JDP2Q8WYK2 163 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 KAZALD1Q96I82 304 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 CRBNQ96SW2 442 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 PSMD1Q99460 953 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 C1orf115Q9H7X2 142 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 ZBTB40Q9NUA8 1239 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 GGA1Q9UJY5 639 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 AK9Q5TCS8 1911 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 LTBP3Q9NS15 1303 aa8.52□□□□□ -1.05
TSPAN6-205ENST00000614008 UFL1O94874 794 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 LMNB1P20700 586 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 IL15P40933 162 aaPredicted RBP8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 ATP8B2P98198 1209 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 ZNF594Q96JF6 807 aaPredicted RBP8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 ZC3H12CQ9C0D7 883 aaKnown RBP8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 ZMYND15Q9H091 742 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 SIL1Q9H173 461 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 VPS33BQ9H267 617 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 COPRSQ9NQ92 184 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
TSPAN6-205ENST00000614008 EYA2O00167 538 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 SURF6O75683 361 aaKnown RBP8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 CIAO1O76071 339 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 CHRNDQ07001 517 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 WASHC4Q2M389 1173 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 CEP85Q6P2H3 762 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 LARGE2Q8N3Y3 721 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 AKAP2Q9Y2D5 859 aa8.5□□□□□ -1.05
TSPAN6-205ENST00000614008 COL4A1P02462 1669 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 MYH7P12883 1935 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 IFIT1P09914 478 aaKnown RBP8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 IARSP41252 1262 aaKnown RBP8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 GPSM2P81274 684 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 CAVIN4Q5BKX8 364 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 NIM1KQ8IY84 436 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 KLHDC4Q8TBB5 520 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 SSH3Q8TE77 659 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 RNF181Q9P0P0 153 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 SCN4AP35499 1836 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 ZNF804BA4D1E1 1349 aa8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
TSPAN6-205ENST00000614008 DUOX1Q9NRD9 1551 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 PNMA6EA0A0J9YXQ4 647 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 RIOK3O14730 519 aaKnown RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 FRAT2O75474 233 aaPredicted RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 PDE8BO95263 885 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 PYGBP11216 843 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 SLC5A1P13866 664 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 EIF6P56537 245 aaKnown RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 IRX6P78412 446 aaPredicted RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 RASSF7Q02833 373 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 UBE4AQ14139 1066 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 PUM3Q15397 648 aaKnown RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 LRRC24Q50LG9 513 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 GORABQ5T7V8 394 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 DPY19L2Q6NUT2 758 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 OLFM4Q6UX06 510 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 ZNF804AQ7Z570 1209 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 TBC1D16Q8TBP0 767 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 RTFDC1Q9BY42 306 aaPredicted RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 RWDD1Q9H446 243 aaPredicted RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 ZNF277Q9NRM2 450 aaPredicted RBP8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 MED23Q9ULK4 1368 aa8.48□□□□□ -1.05
TSPAN6-205ENST00000614008 ECM29Q5VYK3 1845 aa8.47□□□□□ -1.05
TSPAN6-205ENST00000614008 NFKBIEO00221 500 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms