RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 GRAPQ13588 217 aa10.28□□□□□ -0.76
PSMB3-208ENST00000613870 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
PSMB3-208ENST00000613870 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
PSMB3-208ENST00000613870 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
PSMB3-208ENST00000613870 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
PSMB3-208ENST00000613870 CCDC8Q9H0W5 538 aaPredicted RBP10.28□□□□□ -0.76
PSMB3-208ENST00000613870 MX1P20591 662 aa10.27□□□□□ -0.77
PSMB3-208ENST00000613870 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
PSMB3-208ENST00000613870 LARGE2Q8N3Y3 721 aa10.27□□□□□ -0.77
PSMB3-208ENST00000613870 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
PSMB3-208ENST00000613870 CELF1Q92879 486 aaKnown RBP10.27□□□□□ -0.77
PSMB3-208ENST00000613870 RTFDC1Q9BY42 306 aaPredicted RBP10.27□□□□□ -0.77
PSMB3-208ENST00000613870 FBXO3Q9UK99 471 aa10.27□□□□□ -0.77
PSMB3-208ENST00000613870 AKAP2Q9Y2D5 859 aa10.27□□□□□ -0.77
PSMB3-208ENST00000613870 IQCA1LA6NCM1 817 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 PDE1AP54750 535 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 AOC3Q16853 763 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 TNNI3KQ59H18 835 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 TSHZ3Q63HK5 1081 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 ATG9AQ7Z3C6 839 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 GPC2Q8N158 579 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 MPNDQ8N594 471 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 HELBQ8NG08 1087 aaPredicted RBP10.26□□□□□ -0.77
PSMB3-208ENST00000613870 TMX4Q9H1E5 349 aaPredicted RBP10.26□□□□□ -0.77
PSMB3-208ENST00000613870 TAF1DQ9H5J8 278 aaPredicted RBP10.26□□□□□ -0.77
PSMB3-208ENST00000613870 FPGT-TNNI3KV9GXZ4 949 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 LRRC37AA6NMS7 1700 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 MROH5Q6ZUA9 1318 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 RTL9Q8NET4 1388 aa10.26□□□□□ -0.77
PSMB3-208ENST00000613870 LTBP1Q14766 1721 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 ERC2O15083 957 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 PPIP5K2O43314 1243 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 KCNJ4P48050 445 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 EIF6P56537 245 aaKnown RBP10.25□□□□□ -0.77
PSMB3-208ENST00000613870 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
PSMB3-208ENST00000613870 ATP2B3Q16720 1220 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 DPP8Q6V1X1 898 aaPredicted RBP10.25□□□□□ -0.77
PSMB3-208ENST00000613870 EAF2Q96CJ1 260 aaPredicted RBP10.25□□□□□ -0.77
PSMB3-208ENST00000613870 VPS33BQ9H267 617 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 HACL1Q9UJ83 578 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 DUOX1Q9NRD9 1551 aa10.25□□□□□ -0.77
PSMB3-208ENST00000613870 ADAMTSL1Q8N6G6 1762 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 EPHX2P34913 555 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 TIMM10P62072 90 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 TTC22Q5TAA0 569 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 TMC4Q7Z404 712 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 SUPT20HQ8NEM7 779 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 RILPL2Q969X0 211 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 ECHDC1Q9NTX5 307 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 RIPOR2Q9Y4F9 1068 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 GJA3Q9Y6H8 435 aa10.24□□□□□ -0.77
PSMB3-208ENST00000613870 MYH3P11055 1940 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 A0A1B0GUL7 405 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 TAF5LO75529 589 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 GLRX3O76003 335 aaKnown RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 MAP4K4O95819 1239 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 IFIT1P09914 478 aaKnown RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 SLC5A1P13866 664 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 SCNN1DP51172 638 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 KIAA2012Q0VF49 1180 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 PUM3Q15397 648 aaKnown RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 EAPPQ56P03 285 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 CCDC158Q5M9N0 1113 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 TTC39AQ5SRH9 613 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 NIM1KQ8IY84 436 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 DBNDD2Q9BQY9 259 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 GPR108Q9NPR9 543 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 BSDC1Q9NW68 430 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 ZNRF3Q9ULT6 936 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.23□□□□□ -0.77
PSMB3-208ENST00000613870 TTC41PQ6P2S7 1318 aa10.23□□□□□ -0.77
PSMB3-208ENST00000613870 PDE8BO95263 885 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
PSMB3-208ENST00000613870 EPS15P42566 896 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 GPSM2P81274 684 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 CHRNDQ07001 517 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 CXCL9Q07325 125 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 BMP2KLQ5H9B9 411 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 LDHDQ86WU2 507 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 BOLA2Q9H3K6 86 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 ANKIB1Q9P2G1 1089 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 POLLQ9UGP5 575 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 DBNLQ9UJU6 430 aaKnown RBP10.22□□□□□ -0.77
PSMB3-208ENST00000613870 NSFL1CQ9UNZ2 370 aaKnown RBP10.22□□□□□ -0.77
PSMB3-208ENST00000613870 AOX1Q06278 1338 aa10.22□□□□□ -0.77
PSMB3-208ENST00000613870 YDJCA8MPS7 323 aa10.21□□□□□ -0.77
PSMB3-208ENST00000613870 SDSP20132 328 aa10.21□□□□□ -0.77
PSMB3-208ENST00000613870 ADORA1P30542 326 aa10.21□□□□□ -0.77
PSMB3-208ENST00000613870 PNMA8AQ86V59 439 aaPredicted RBP10.21□□□□□ -0.77
PSMB3-208ENST00000613870 VPS37DQ86XT2 251 aa10.21□□□□□ -0.77
PSMB3-208ENST00000613870 LPIN2Q92539 896 aa10.21□□□□□ -0.77
PSMB3-208ENST00000613870 XAGE2Q96GT9 111 aa10.21□□□□□ -0.77
PSMB3-208ENST00000613870 DNAJC2Q99543 621 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms