RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 BCAMP50895 628 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
TMEM254-213ENST00000613758 SPON1Q9HCB6 807 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
TMEM254-213ENST00000613758 A0A1B0GUL6 1792 aa16.75■□□□□ 0.27
TMEM254-213ENST00000613758 CDC45O75419 566 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 KCNA3P22001 575 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 CAVIN4Q5BKX8 364 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
TMEM254-213ENST00000613758 GGA1Q9UJY5 639 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
TMEM254-213ENST00000613758 GYG1P46976 350 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
TMEM254-213ENST00000613758 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
TMEM254-213ENST00000613758 UFL1O94874 794 aa16.73■□□□□ 0.27
TMEM254-213ENST00000613758 KLRK1P26718 216 aa16.73■□□□□ 0.27
TMEM254-213ENST00000613758 ARID4AP29374 1257 aaPredicted RBP16.73■□□□□ 0.27
TMEM254-213ENST00000613758 SCARF1Q14162 830 aa16.73■□□□□ 0.27
TMEM254-213ENST00000613758 MPNDQ8N594 471 aa16.73■□□□□ 0.27
TMEM254-213ENST00000613758 FAM84BQ96KN1 310 aaPredicted RBP16.73■□□□□ 0.27
TMEM254-213ENST00000613758 ARAP2Q8WZ64 1704 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
TMEM254-213ENST00000613758 SNRKQ9NRH2 765 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
TMEM254-213ENST00000613758 MCAMP43121 646 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
TMEM254-213ENST00000613758 FBXO33Q7Z6M2 555 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 VPS37DQ86XT2 251 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 C7orf43Q8WVR3 580 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
TMEM254-213ENST00000613758 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 C6orf229H3BNL8 230 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
TMEM254-213ENST00000613758 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.27
TMEM254-213ENST00000613758 TXNRD3Q86VQ6 643 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
TMEM254-213ENST00000613758 PAG1Q9NWQ8 432 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 LRRC37AA6NMS7 1700 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 SLX4Q8IY92 1834 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 GOLIM4O00461 696 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 HIBADHP31937 336 aaKnown RBP16.71■□□□□ 0.27
TMEM254-213ENST00000613758 ZAP70P43403 619 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 GPR101Q96P66 508 aaPredicted RBP16.71■□□□□ 0.27
TMEM254-213ENST00000613758 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
TMEM254-213ENST00000613758 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 HMG20BQ9P0W2 317 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 CHMLP26374 656 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 RASGRF1Q13972 1273 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
TMEM254-213ENST00000613758 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
TMEM254-213ENST00000613758 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
TMEM254-213ENST00000613758 C21orf2O43822 256 aa16.69■□□□□ 0.26
TMEM254-213ENST00000613758 SPATA5Q8NB90 893 aa16.69■□□□□ 0.26
TMEM254-213ENST00000613758 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
TMEM254-213ENST00000613758 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
TMEM254-213ENST00000613758 IPO9Q96P70 1041 aaKnown RBP16.68■□□□□ 0.26
TMEM254-213ENST00000613758 ZNF804AQ7Z570 1209 aa16.68■□□□□ 0.26
TMEM254-213ENST00000613758 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
TMEM254-213ENST00000613758 CYP2E1P05181 493 aaPredicted RBP16.67■□□□□ 0.26
TMEM254-213ENST00000613758 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
TMEM254-213ENST00000613758 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
TMEM254-213ENST00000613758 SEMA3EO15041 775 aa16.67■□□□□ 0.26
TMEM254-213ENST00000613758 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
TMEM254-213ENST00000613758 DALRD3Q5D0E6 543 aaKnown RBP16.67■□□□□ 0.26
TMEM254-213ENST00000613758 ZC3H12CQ9C0D7 883 aaKnown RBP16.67■□□□□ 0.26
TMEM254-213ENST00000613758 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
TMEM254-213ENST00000613758 DENND2AQ9ULE3 1009 aa16.67■□□□□ 0.26
TMEM254-213ENST00000613758 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
TMEM254-213ENST00000613758 HIP1O00291 1037 aa16.66■□□□□ 0.26
TMEM254-213ENST00000613758 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
TMEM254-213ENST00000613758 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
TMEM254-213ENST00000613758 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
TMEM254-213ENST00000613758 WWC3Q9ULE0 1092 aa16.66■□□□□ 0.26
TMEM254-213ENST00000613758 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
TMEM254-213ENST00000613758 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 EYA3Q99504 573 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
TMEM254-213ENST00000613758 AK9Q5TCS8 1911 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 ZBTB22O15209 634 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 RTKN2Q8IZC4 609 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 TDRD7Q8NHU6 1098 aaKnown RBP16.65■□□□□ 0.26
TMEM254-213ENST00000613758 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
TMEM254-213ENST00000613758 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
TMEM254-213ENST00000613758 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
TMEM254-213ENST00000613758 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
TMEM254-213ENST00000613758 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
TMEM254-213ENST00000613758 CD209Q9NNX6 404 aa16.64■□□□□ 0.25
TMEM254-213ENST00000613758 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms