RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 CLEC11AQ9Y240 323 aa32.52■■■□□ 2.8
VEGFA-226ENST00000611736 CEP350Q5VT06 3117 aa32.52■■■□□ 2.8
VEGFA-226ENST00000611736 METTL24Q5JXM2 366 aa32.51■■■□□ 2.79
VEGFA-226ENST00000611736 CHADLQ6NUI6 762 aa32.51■■■□□ 2.79
VEGFA-226ENST00000611736 ITPRIPQ8IWB1 547 aa32.51■■■□□ 2.79
VEGFA-226ENST00000611736 PSME4Q14997 1843 aa32.5■■■□□ 2.79
VEGFA-226ENST00000611736 SHTN1A0MZ66 631 aa32.5■■■□□ 2.79
VEGFA-226ENST00000611736 PTPN12Q05209 780 aaKnown RBP32.5■■■□□ 2.79
VEGFA-226ENST00000611736 IRS2Q9Y4H2 1338 aa32.5■■■□□ 2.79
VEGFA-226ENST00000611736 GNAI2P04899 355 aa32.49■■■□□ 2.79
VEGFA-226ENST00000611736 VIL1P09327 827 aaKnown RBP32.49■■■□□ 2.79
VEGFA-226ENST00000611736 ADARB2Q9NS39 739 aaKnown RBP32.49■■■□□ 2.79
VEGFA-226ENST00000611736 CNOT7Q9UIV1 285 aaKnown RBP32.49■■■□□ 2.79
VEGFA-226ENST00000611736 USP17L3A6NCW0 530 aa32.48■■■□□ 2.79
VEGFA-226ENST00000611736 USP17L4A6NCW7 530 aa32.48■■■□□ 2.79
VEGFA-226ENST00000611736 USP17L1Q7RTZ2 530 aa32.48■■■□□ 2.79
VEGFA-226ENST00000611736 MICALL2Q8IY33 904 aa32.48■■■□□ 2.79
VEGFA-226ENST00000611736 PANK1Q8TE04 598 aa32.48■■■□□ 2.79
VEGFA-226ENST00000611736 FBXW7Q969H0 707 aa32.48■■■□□ 2.79
VEGFA-226ENST00000611736 EYA2O00167 538 aa32.47■■■□□ 2.79
VEGFA-226ENST00000611736 RPS12P25398 132 aaKnown RBP32.47■■■□□ 2.79
VEGFA-226ENST00000611736 C15orf52Q6ZUT6 534 aaKnown RBP32.47■■■□□ 2.79
VEGFA-226ENST00000611736 DPF2Q92785 391 aa32.47■■■□□ 2.79
VEGFA-226ENST00000611736 SIL1Q9H173 461 aa32.47■■■□□ 2.79
VEGFA-226ENST00000611736 ADAMTSL1Q8N6G6 1762 aa32.47■■■□□ 2.79
VEGFA-226ENST00000611736 UBE4AQ14139 1066 aa32.46■■■□□ 2.79
VEGFA-226ENST00000611736 RSBN1LQ6PCB5 846 aaPredicted RBP32.46■■■□□ 2.79
VEGFA-226ENST00000611736 USP50Q70EL3 339 aaPredicted RBP32.46■■■□□ 2.79
VEGFA-226ENST00000611736 H7C1D1 291 aa32.45■■■□□ 2.79
VEGFA-226ENST00000611736 CD209Q9NNX6 404 aa32.45■■■□□ 2.79
VEGFA-226ENST00000611736 PA2G4Q9UQ80 394 aaKnown RBP32.45■■■□□ 2.79
VEGFA-226ENST00000611736 SRGAP3O43295 1099 aa32.44■■■□□ 2.78
VEGFA-226ENST00000611736 ZNF804AQ7Z570 1209 aa32.44■■■□□ 2.78
VEGFA-226ENST00000611736 VGLL2Q8N8G2 317 aa32.44■■■□□ 2.78
VEGFA-226ENST00000611736 TRPM4Q8TD43 1214 aa32.43■■■□□ 2.78
VEGFA-226ENST00000611736 PDE8BO95263 885 aa32.42■■■□□ 2.78
VEGFA-226ENST00000611736 MAP1SQ66K74 1059 aaPredicted RBP32.42■■■□□ 2.78
VEGFA-226ENST00000611736 ATG9AQ7Z3C6 839 aa32.42■■■□□ 2.78
VEGFA-226ENST00000611736 MXD3Q9BW11 206 aa32.42■■■□□ 2.78
VEGFA-226ENST00000611736 MS4A1P11836 297 aa32.41■■■□□ 2.78
VEGFA-226ENST00000611736 MTX1Q13505 466 aa32.41■■■□□ 2.78
VEGFA-226ENST00000611736 DACT2Q5SW24 774 aa32.41■■■□□ 2.78
VEGFA-226ENST00000611736 AGBL3Q8NEM8 1001 aa32.41■■■□□ 2.78
VEGFA-226ENST00000611736 C1orf115Q9H7X2 142 aa32.41■■■□□ 2.78
VEGFA-226ENST00000611736 GTF2IP78347 998 aa32.4■■■□□ 2.78
VEGFA-226ENST00000611736 STRIP1Q5VSL9 837 aa32.4■■■□□ 2.78
VEGFA-226ENST00000611736 TTLL5Q6EMB2 1281 aa32.4■■■□□ 2.78
VEGFA-226ENST00000611736 SAMD7Q7Z3H4 446 aa32.4■■■□□ 2.78
VEGFA-226ENST00000611736 COPRSQ9NQ92 184 aa32.4■■■□□ 2.78
VEGFA-226ENST00000611736 ZNF646O15015 1829 aaPredicted RBP32.4■■■□□ 2.78
VEGFA-226ENST00000611736 ZBTB7BO15156 539 aaPredicted RBP32.39■■■□□ 2.78
VEGFA-226ENST00000611736 CIAO1O76071 339 aa32.39■■■□□ 2.78
VEGFA-226ENST00000611736 GYG1P46976 350 aa32.39■■■□□ 2.78
VEGFA-226ENST00000611736 TBC1D10BQ4KMP7 808 aaPredicted RBP32.39■■■□□ 2.78
VEGFA-226ENST00000611736 FBXO3Q9UK99 471 aa32.39■■■□□ 2.78
VEGFA-226ENST00000611736 ZNF609O15014 1411 aa32.38■■■□□ 2.77
VEGFA-226ENST00000611736 HIRAP54198 1017 aaPredicted RBP32.38■■■□□ 2.77
VEGFA-226ENST00000611736 CNTROBQ8N137 903 aa32.38■■■□□ 2.77
VEGFA-226ENST00000611736 GMLQ99445 158 aa32.38■■■□□ 2.77
VEGFA-226ENST00000611736 EGFRP00533 1210 aa32.37■■■□□ 2.77
VEGFA-226ENST00000611736 IL1R1P14778 569 aa32.37■■■□□ 2.77
VEGFA-226ENST00000611736 HIBADHP31937 336 aaKnown RBP32.37■■■□□ 2.77
VEGFA-226ENST00000611736 PUM3Q15397 648 aaKnown RBP32.37■■■□□ 2.77
VEGFA-226ENST00000611736 RBM26Q5T8P6 1007 aaKnown RBP32.37■■■□□ 2.77
VEGFA-226ENST00000611736 FAM84BQ96KN1 310 aaPredicted RBP32.37■■■□□ 2.77
VEGFA-226ENST00000611736 PNMA6EA0A0J9YXQ4 647 aa32.36■■■□□ 2.77
VEGFA-226ENST00000611736 IL15P40933 162 aaPredicted RBP32.35■■■□□ 2.77
VEGFA-226ENST00000611736 CEP126Q9P2H0 1117 aa32.35■■■□□ 2.77
VEGFA-226ENST00000611736 JAG2Q9Y219 1238 aa32.35■■■□□ 2.77
VEGFA-226ENST00000611736 ITGBL1O95965 494 aaPredicted RBP32.34■■■□□ 2.77
VEGFA-226ENST00000611736 USP17L8P0C7I0 530 aa32.34■■■□□ 2.77
VEGFA-226ENST00000611736 FGFR2P21802 821 aa32.34■■■□□ 2.77
VEGFA-226ENST00000611736 HTRA3P83110 453 aa32.34■■■□□ 2.77
VEGFA-226ENST00000611736 VPS37DQ86XT2 251 aa32.34■■■□□ 2.77
VEGFA-226ENST00000611736 COG6Q9Y2V7 657 aa32.34■■■□□ 2.77
VEGFA-226ENST00000611736 MYO3BQ8WXR4 1341 aa32.33■■■□□ 2.77
VEGFA-226ENST00000611736 IFIT1P09914 478 aaKnown RBP32.33■■■□□ 2.77
VEGFA-226ENST00000611736 ZNF280AP59817 542 aaPredicted RBP32.33■■■□□ 2.77
VEGFA-226ENST00000611736 MVPQ14764 893 aaKnown RBP32.33■■■□□ 2.77
VEGFA-226ENST00000611736 KIF4BQ2VIQ3 1234 aa32.33■■■□□ 2.77
VEGFA-226ENST00000611736 PASKQ96RG2 1323 aa32.32■■■□□ 2.76
VEGFA-226ENST00000611736 SLC5A1P13866 664 aa32.32■■■□□ 2.76
VEGFA-226ENST00000611736 CAVIN4Q5BKX8 364 aa32.32■■■□□ 2.76
VEGFA-226ENST00000611736 FBXO33Q7Z6M2 555 aa32.32■■■□□ 2.76
VEGFA-226ENST00000611736 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.32■■■□□ 2.76
VEGFA-226ENST00000611736 TDRD7Q8NHU6 1098 aaKnown RBP32.31■■■□□ 2.76
VEGFA-226ENST00000611736 LPIN2Q92539 896 aa32.31■■■□□ 2.76
VEGFA-226ENST00000611736 BCAMP50895 628 aa32.3■■■□□ 2.76
VEGFA-226ENST00000611736 ATP8B2P98198 1209 aa32.3■■■□□ 2.76
VEGFA-226ENST00000611736 ATP2B3Q16720 1220 aa32.3■■■□□ 2.76
VEGFA-226ENST00000611736 KIAA0825Q8IV33 1275 aa32.3■■■□□ 2.76
VEGFA-226ENST00000611736 ZC3H15Q8WU90 426 aaKnown RBP32.3■■■□□ 2.76
VEGFA-226ENST00000611736 IQSEC3Q9UPP2 1182 aaPredicted RBP32.3■■■□□ 2.76
VEGFA-226ENST00000611736 SASH1O94885 1247 aa32.29■■■□□ 2.76
VEGFA-226ENST00000611736 DNAJC5GQ8N7S2 189 aa32.29■■■□□ 2.76
VEGFA-226ENST00000611736 MYOZ2Q9NPC6 264 aa32.29■■■□□ 2.76
VEGFA-226ENST00000611736 PGAP2Q9UHJ9 254 aa32.29■■■□□ 2.76
VEGFA-226ENST00000611736 C20orf194Q5TEA3 1177 aa32.28■■■□□ 2.76
VEGFA-226ENST00000611736 OGFOD1Q8N543 542 aa32.28■■■□□ 2.76
VEGFA-226ENST00000611736 CERS5Q8N5B7 392 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms