RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RSBN1LQ6PCB5 846 aaPredicted RBP9.05□□□□□ -0.96
CBWD1-219ENST00000611457 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
CBWD1-219ENST00000611457 RNF181Q9P0P0 153 aa9.05□□□□□ -0.96
CBWD1-219ENST00000611457 RRP7AQ9Y3A4 280 aaKnown RBP9.05□□□□□ -0.96
CBWD1-219ENST00000611457 ARID4AP29374 1257 aaPredicted RBP9.05□□□□□ -0.96
CBWD1-219ENST00000611457 SERPINA10Q9UK55 444 aa9.05□□□□□ -0.96
CBWD1-219ENST00000611457 BCS1LQ9Y276 419 aa9.05□□□□□ -0.96
CBWD1-219ENST00000611457 MAST3O60307 1309 aa9.04□□□□□ -0.96
CBWD1-219ENST00000611457 MYL6BP14649 208 aa9.04□□□□□ -0.96
CBWD1-219ENST00000611457 NIM1KQ8IY84 436 aa9.04□□□□□ -0.96
CBWD1-219ENST00000611457 TSR2Q969E8 191 aaKnown RBP9.04□□□□□ -0.96
CBWD1-219ENST00000611457 GGA1Q9UJY5 639 aa9.04□□□□□ -0.96
CBWD1-219ENST00000611457 ANKRD18BA2A2Z9 1011 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 NOL9Q5SY16 702 aaKnown RBP9.03□□□□□ -0.96
CBWD1-219ENST00000611457 ATG9AQ7Z3C6 839 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 TBC1D22AQ8WUA7 517 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
CBWD1-219ENST00000611457 C21orf2O43822 256 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
CBWD1-219ENST00000611457 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-219ENST00000611457 ATF7IPQ6VMQ6 1270 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 ARHGAP27Q6ZUM4 889 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 MSH5O43196 834 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 CA12O43570 354 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 HHIPL2Q6UWX4 724 aa9.03□□□□□ -0.96
CBWD1-219ENST00000611457 DEKP35659 375 aaKnown RBP9.02□□□□□ -0.97
CBWD1-219ENST00000611457 KLRG1Q96E93 195 aa9.02□□□□□ -0.97
CBWD1-219ENST00000611457 GPBP1L1Q9HC44 474 aaPredicted RBP9.02□□□□□ -0.97
CBWD1-219ENST00000611457 MAP2K2P36507 400 aa9.02□□□□□ -0.97
CBWD1-219ENST00000611457 SLC45A1Q9Y2W3 748 aa9.02□□□□□ -0.97
CBWD1-219ENST00000611457 PTPN12Q05209 780 aaKnown RBP9.01□□□□□ -0.97
CBWD1-219ENST00000611457 CXCL9Q07325 125 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 FAM83AQ86UY5 434 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 SUCLG2Q96I99 432 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 GREM2Q9H772 168 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 ECE2O60344 883 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 EPHX2P34913 555 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 IL15P40933 162 aaPredicted RBP9.01□□□□□ -0.97
CBWD1-219ENST00000611457 APOBEC3FQ8IUX4 373 aaKnown RBP9.01□□□□□ -0.97
CBWD1-219ENST00000611457 MAF1Q9H063 256 aa9.01□□□□□ -0.97
CBWD1-219ENST00000611457 USP17L3A6NCW0 530 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 USP17L4A6NCW7 530 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 ITGA6P23229 1130 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 IGHMBP2P38935 993 aaKnown RBP9□□□□□ -0.97
CBWD1-219ENST00000611457 USP17L1Q7RTZ2 530 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 AOX1Q06278 1338 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 TBC1D12O60347 775 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 EYA2O00167 538 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
CBWD1-219ENST00000611457 LDLRAD1Q5T700 205 aa9□□□□□ -0.97
CBWD1-219ENST00000611457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
CBWD1-219ENST00000611457 PDE8BO95263 885 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 EIF2S2P20042 333 aaKnown RBP8.99□□□□□ -0.97
CBWD1-219ENST00000611457 ATP8B2P98198 1209 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 PUM3Q15397 648 aaKnown RBP8.99□□□□□ -0.97
CBWD1-219ENST00000611457 ZDHHC15Q96MV8 337 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 SYNPO2Q9UMS6 1093 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 ROBO3Q96MS0 1386 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 FAM155AB1AL88 458 aaPredicted RBP8.99□□□□□ -0.97
CBWD1-219ENST00000611457 SASH1O94885 1247 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 EPHA10Q5JZY3 1008 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 ZNF804AQ7Z570 1209 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 LPIN2Q92539 896 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 FAM89AQ96GI7 184 aa8.99□□□□□ -0.97
CBWD1-219ENST00000611457 CHRNDQ07001 517 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 WASHC4Q2M389 1173 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 JDP2Q8WYK2 163 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 ZNF622Q969S3 477 aaKnown RBP eCLIP8.98□□□□□ -0.97
CBWD1-219ENST00000611457 IFIT5Q13325 482 aaKnown RBP8.98□□□□□ -0.97
CBWD1-219ENST00000611457 ZKSCAN2Q63HK3 967 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 IDI2Q9BXS1 227 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 TMX4Q9H1E5 349 aaPredicted RBP8.98□□□□□ -0.97
CBWD1-219ENST00000611457 ZMYM6O95789 1325 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 ADGRA2Q96PE1 1338 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 RPAP2Q8IXW5 612 aaPredicted RBP8.98□□□□□ -0.97
CBWD1-219ENST00000611457 ZGPATQ8N5A5 531 aaKnown RBP8.98□□□□□ -0.97
CBWD1-219ENST00000611457 HOOK2Q96ED9 719 aa8.98□□□□□ -0.97
CBWD1-219ENST00000611457 SALL3Q9BXA9 1300 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 TRIM27P14373 513 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
CBWD1-219ENST00000611457 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 CD209Q9NNX6 404 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 RAB11FIP3O75154 756 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 HCLS1P14317 486 aaPredicted RBP8.97□□□□□ -0.97
CBWD1-219ENST00000611457 TMEM88BA6NKF7 163 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 SLC10A3P09131 477 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 GPTP24298 496 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 PPP4CP60510 307 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 AKAP2Q9Y2D5 859 aa8.97□□□□□ -0.97
CBWD1-219ENST00000611457 PPIP5K2O43314 1243 aa8.96□□□□□ -0.97
CBWD1-219ENST00000611457 TM4SF4P48230 202 aa8.96□□□□□ -0.97
CBWD1-219ENST00000611457 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.97
CBWD1-219ENST00000611457 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.97
CBWD1-219ENST00000611457 ZBTB40Q9NUA8 1239 aa8.96□□□□□ -0.97
CBWD1-219ENST00000611457 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.98
CBWD1-219ENST00000611457 ZNF277Q9NRM2 450 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms