RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	PSMD1	Q99460	953 aa		11.15	□□□□□ -0.62
LINC00635-222	ENST00000609429		A0A1B0GUL6	1792 aa		11.15	□□□□□ -0.62
LINC00635-222	ENST00000609429	XDH	P47989	1333 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	MROH5	Q6ZUA9	1318 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	CIAO1	O76071	339 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	MKRN3	Q13064	507 aa	Known RBP	11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	LDHAL6A	Q6ZMR3	332 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	C7orf43	Q8WVR3	580 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	CELF1	Q92879	486 aa	Known RBP	11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	COPRS	Q9NQ92	184 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	SEC31B	Q9NQW1	1179 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	CNNM1	Q9NRU3	951 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	PODXL2	Q9NZ53	605 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	LTBP1	Q14766	1721 aa		11.14	□□□□□ -0.63
LINC00635-222	ENST00000609429	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	SNED1	Q8TER0	1413 aa		11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	ATP8B2	P98198	1209 aa		11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	CEP85	Q6P2H3	762 aa		11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	DPP8	Q6V1X1	898 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	SSH3	Q8TE77	659 aa		11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	EYA3	Q99504	573 aa		11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	TAOK3	Q9H2K8	898 aa		11.13	□□□□□ -0.63
LINC00635-222	ENST00000609429	EYA2	O00167	538 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	C21orf2	O43822	256 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	IL15	P40933	162 aa	Predicted RBP	11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	PTPN12	Q05209	780 aa	Known RBP	11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	ERC1	Q8IUD2	1116 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	MPND	Q8N594	471 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	CRBN	Q96SW2	442 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	LEMD3	Q9Y2U8	911 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	TAF1	P21675	1872 aa		11.12	□□□□□ -0.63
LINC00635-222	ENST00000609429	ATP2B4	P23634	1241 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	RFX5	P48382	616 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	ERICH6B	Q5W0A0	696 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	ANKIB1	Q9P2G1	1089 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	GGA1	Q9UJY5	639 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	MINPP1	Q9UNW1	487 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	MED23	Q9ULK4	1368 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	DUOX1	Q9NRD9	1551 aa		11.11	□□□□□ -0.63
LINC00635-222	ENST00000609429	ARAP2	Q8WZ64	1704 aa		11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	DICER1	Q9UPY3	1922 aa	Known RBP	11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	HOXB3	P14651	431 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	YBX3	P16989	372 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	KCNJ4	P48050	445 aa		11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	C1orf115	Q9H7X2	142 aa		11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	NOP58	Q9Y2X3	529 aa	Known RBP	11.1	□□□□□ -0.63
LINC00635-222	ENST00000609429	TIAM2	Q8IVF5	1701 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	CHD4	Q14839	1912 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	COL4A1	P02462	1669 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	PNMA6E	A0A0J9YXQ4	647 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	RAB11FIP3	O75154	756 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	LMNB1	P20700	586 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	CHRND	Q07001	517 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	OS9	Q13438	667 aa	Predicted RBP	11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	UBE4A	Q14139	1066 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	METTL24	Q5JXM2	366 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	DPY19L2	Q6NUT2	758 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	ARHGAP27	Q6ZUM4	889 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	CEP126	Q9P2H0	1117 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	AKAP2	Q9Y2D5	859 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	RIPOR2	Q9Y4F9	1068 aa		11.09	□□□□□ -0.63
LINC00635-222	ENST00000609429	NFKBIE	O00221	500 aa		11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	UFL1	O94874	794 aa		11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	PDE8B	O95263	885 aa		11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	HDAC1	Q13547	482 aa	Predicted RBP	11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	PUM3	Q15397	648 aa	Known RBP	11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	C15orf52	Q6ZUT6	534 aa	Known RBP	11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	ZNF594	Q96JF6	807 aa	Predicted RBP	11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	GPR108	Q9NPR9	543 aa		11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	ZNF804B	A4D1E1	1349 aa		11.08	□□□□□ -0.64
LINC00635-222	ENST00000609429	SBF1	O95248	1867 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	C6orf229	H3BNL8	230 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	SURF6	O75683	361 aa	Known RBP	11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	IFIT1	P09914	478 aa	Known RBP	11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	CHRM1	P11229	460 aa	Predicted RBP	11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	IARS	P41252	1262 aa	Known RBP	11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	PSEN1	P49768	467 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	GPSM2	P81274	684 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	KIAA2012	Q0VF49	1180 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	TBC1D16	Q8TBP0	767 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	JDP2	Q8WYK2	163 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	GCC1	Q96CN9	775 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	KIF1BP	Q96EK5	621 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	SIL1	Q9H173	461 aa		11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	RWDD1	Q9H446	243 aa	Predicted RBP	11.07	□□□□□ -0.64
LINC00635-222	ENST00000609429	PPIP5K2	O43314	1243 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	SLC5A1	P13866	664 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	WASHC4	Q2M389	1173 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	LRRC24	Q50LG9	513 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	ATG9A	Q7Z3C6	839 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	ZNF804A	Q7Z570	1209 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	VGLL2	Q8N8G2	317 aa		11.06	□□□□□ -0.64
LINC00635-222	ENST00000609429	EXOC6	Q8TAG9	804 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms