RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
CTSA-218ENST00000607814 G3V3G9 751 aa17.4■□□□□ 0.38
CTSA-218ENST00000607814 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
CTSA-218ENST00000607814 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
CTSA-218ENST00000607814 FLIIQ13045 1269 aa17.4■□□□□ 0.38
CTSA-218ENST00000607814 SCARF1Q14162 830 aa17.4■□□□□ 0.38
CTSA-218ENST00000607814 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
CTSA-218ENST00000607814 RSBN1LQ6PCB5 846 aaPredicted RBP17.4■□□□□ 0.38
CTSA-218ENST00000607814 ZNF296Q8WUU4 475 aaPredicted RBP17.39■□□□□ 0.37
CTSA-218ENST00000607814 ASTN2O75129 1339 aaPredicted RBP17.39■□□□□ 0.37
CTSA-218ENST00000607814 USP17L8P0C7I0 530 aa17.38■□□□□ 0.37
CTSA-218ENST00000607814 TM4SF4P48230 202 aa17.38■□□□□ 0.37
CTSA-218ENST00000607814 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
CTSA-218ENST00000607814 FBXO46Q6PJ61 603 aaPredicted RBP17.38■□□□□ 0.37
CTSA-218ENST00000607814 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
CTSA-218ENST00000607814 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
CTSA-218ENST00000607814 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
CTSA-218ENST00000607814 CWC25Q9NXE8 425 aaPredicted RBP17.38■□□□□ 0.37
CTSA-218ENST00000607814 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
CTSA-218ENST00000607814 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
CTSA-218ENST00000607814 PSME4Q14997 1843 aa17.37■□□□□ 0.37
CTSA-218ENST00000607814 F6X3S4 739 aa17.37■□□□□ 0.37
CTSA-218ENST00000607814 UFL1O94874 794 aa17.37■□□□□ 0.37
CTSA-218ENST00000607814 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
CTSA-218ENST00000607814 GMLQ99445 158 aa17.37■□□□□ 0.37
CTSA-218ENST00000607814 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
CTSA-218ENST00000607814 GPR25O00155 361 aa17.36■□□□□ 0.37
CTSA-218ENST00000607814 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
CTSA-218ENST00000607814 PODNQ7Z5L7 613 aa17.36■□□□□ 0.37
CTSA-218ENST00000607814 SEC31BQ9NQW1 1179 aa17.36■□□□□ 0.37
CTSA-218ENST00000607814 COL4A1P02462 1669 aa17.36■□□□□ 0.37
CTSA-218ENST00000607814 MKI67P46013 3256 aaKnown RBP17.35■□□□□ 0.37
CTSA-218ENST00000607814 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
CTSA-218ENST00000607814 TBC1D8O95759 1140 aa17.35■□□□□ 0.37
CTSA-218ENST00000607814 PCCAP05165 728 aaPredicted RBP17.35■□□□□ 0.37
CTSA-218ENST00000607814 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
CTSA-218ENST00000607814 HTTP42858 3142 aa17.35■□□□□ 0.37
CTSA-218ENST00000607814 USP17L3A6NCW0 530 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 USP17L4A6NCW7 530 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 NF2P35240 595 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 MMP14P50281 582 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 USP17L1Q7RTZ2 530 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
CTSA-218ENST00000607814 XDHP47989 1333 aa17.33■□□□□ 0.36
CTSA-218ENST00000607814 E9PSI1 815 aa17.33■□□□□ 0.36
CTSA-218ENST00000607814 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.36
CTSA-218ENST00000607814 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
CTSA-218ENST00000607814 FKTNO75072 461 aa17.32■□□□□ 0.36
CTSA-218ENST00000607814 UBE3BQ7Z3V4 1068 aa17.32■□□□□ 0.36
CTSA-218ENST00000607814 PDE8AO60658 829 aa17.31■□□□□ 0.36
CTSA-218ENST00000607814 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
CTSA-218ENST00000607814 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
CTSA-218ENST00000607814 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
CTSA-218ENST00000607814 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
CTSA-218ENST00000607814 CENPFP49454 3210 aa17.3■□□□□ 0.36
CTSA-218ENST00000607814 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
CTSA-218ENST00000607814 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
CTSA-218ENST00000607814 GCKRQ14397 625 aa17.3■□□□□ 0.36
CTSA-218ENST00000607814 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
CTSA-218ENST00000607814 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
CTSA-218ENST00000607814 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
CTSA-218ENST00000607814 H7C1W4 665 aa17.29■□□□□ 0.36
CTSA-218ENST00000607814 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
CTSA-218ENST00000607814 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
CTSA-218ENST00000607814 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
CTSA-218ENST00000607814 WNT10BO00744 389 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 INHBEP58166 350 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 LINS1Q8NG48 757 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 GREM2Q9H772 168 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
CTSA-218ENST00000607814 CTSWP56202 376 aa17.27■□□□□ 0.36
CTSA-218ENST00000607814 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
CTSA-218ENST00000607814 STRIP1Q5VSL9 837 aa17.27■□□□□ 0.36
CTSA-218ENST00000607814 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
CTSA-218ENST00000607814 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.36
CTSA-218ENST00000607814 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
CTSA-218ENST00000607814 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
CTSA-218ENST00000607814 CASP7P55210 303 aa17.26■□□□□ 0.35
CTSA-218ENST00000607814 HABP4Q5JVS0 413 aaKnown RBP17.26■□□□□ 0.35
CTSA-218ENST00000607814 LDLRAD1Q5T700 205 aa17.26■□□□□ 0.35
CTSA-218ENST00000607814 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
CTSA-218ENST00000607814 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
CTSA-218ENST00000607814 KIAA0100Q14667 2235 aaKnown RBP17.26■□□□□ 0.35
CTSA-218ENST00000607814 BRCA2P51587 3418 aa17.25■□□□□ 0.35
CTSA-218ENST00000607814 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
CTSA-218ENST00000607814 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSA-218ENST00000607814 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
CTSA-218ENST00000607814 SPRYD7Q5W111 196 aa17.25■□□□□ 0.35
CTSA-218ENST00000607814 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
CTSA-218ENST00000607814 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
CTSA-218ENST00000607814 UNCXA6NJT0 531 aa17.24■□□□□ 0.35
CTSA-218ENST00000607814 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
CTSA-218ENST00000607814 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
CTSA-218ENST00000607814 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
CTSA-218ENST00000607814 ZBTB48P10074 688 aaPredicted RBP17.23■□□□□ 0.35
CTSA-218ENST00000607814 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
CTSA-218ENST00000607814 EPHA10Q5JZY3 1008 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms