RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 COA1Q9GZY4 146 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
CTSA-213ENST00000606782 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
CTSA-213ENST00000606782 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
CTSA-213ENST00000606782 TXNRD3Q86VQ6 643 aa16.93■□□□□ 0.3
CTSA-213ENST00000606782 DCPSQ96C86 337 aaKnown RBP16.93■□□□□ 0.3
CTSA-213ENST00000606782 SPEF2Q9C093 1822 aa16.93■□□□□ 0.3
CTSA-213ENST00000606782 ZNF804BA4D1E1 1349 aa16.93■□□□□ 0.3
CTSA-213ENST00000606782 GRM8O00222 908 aa16.92■□□□□ 0.3
CTSA-213ENST00000606782 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
CTSA-213ENST00000606782 MMP14P50281 582 aa16.92■□□□□ 0.3
CTSA-213ENST00000606782 DACT2Q5SW24 774 aa16.92■□□□□ 0.3
CTSA-213ENST00000606782 RBM26Q5T8P6 1007 aaKnown RBP16.92■□□□□ 0.3
CTSA-213ENST00000606782 STRIP1Q5VSL9 837 aa16.92■□□□□ 0.3
CTSA-213ENST00000606782 C15orf52Q6ZUT6 534 aaKnown RBP16.92■□□□□ 0.3
CTSA-213ENST00000606782 IRS2Q9Y4H2 1338 aa16.92■□□□□ 0.3
CTSA-213ENST00000606782 CHRNDQ07001 517 aa16.91■□□□□ 0.3
CTSA-213ENST00000606782 IFIT5Q13325 482 aaKnown RBP16.91■□□□□ 0.3
CTSA-213ENST00000606782 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
CTSA-213ENST00000606782 ZNF646O15015 1829 aaPredicted RBP16.91■□□□□ 0.3
CTSA-213ENST00000606782 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 DLK2Q6UY11 383 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 MYOZ2Q9NPC6 264 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 UTYO14607 1347 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 PITPNM2Q9BZ72 1349 aa16.9■□□□□ 0.3
CTSA-213ENST00000606782 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
CTSA-213ENST00000606782 HSPA8P11142 646 aaKnown RBP16.89■□□□□ 0.29
CTSA-213ENST00000606782 SCARF1Q14162 830 aa16.89■□□□□ 0.29
CTSA-213ENST00000606782 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
CTSA-213ENST00000606782 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
CTSA-213ENST00000606782 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.29
CTSA-213ENST00000606782 C9orf78Q9NZ63 289 aaPredicted RBP16.89■□□□□ 0.29
CTSA-213ENST00000606782 ASTN2O75129 1339 aaPredicted RBP16.89■□□□□ 0.29
CTSA-213ENST00000606782 KLRK1P26718 216 aa16.88■□□□□ 0.29
CTSA-213ENST00000606782 LBX1P52954 281 aa16.88■□□□□ 0.29
CTSA-213ENST00000606782 KAZALD1Q96I82 304 aa16.88■□□□□ 0.29
CTSA-213ENST00000606782 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
CTSA-213ENST00000606782 GBA2Q9HCG7 927 aaPredicted RBP16.88■□□□□ 0.29
CTSA-213ENST00000606782 AOC2O75106 756 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 BRPF1P55201 1214 aaPredicted RBP16.87■□□□□ 0.29
CTSA-213ENST00000606782 HUNKP57058 714 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 ANGEL2Q5VTE6 544 aaKnown RBP16.87■□□□□ 0.29
CTSA-213ENST00000606782 TTLL5Q6EMB2 1281 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 C2orf69Q8N8R5 385 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 PTPRCP08575 1304 aa16.87■□□□□ 0.29
CTSA-213ENST00000606782 CA12O43570 354 aa16.86■□□□□ 0.29
CTSA-213ENST00000606782 NOGQ13253 232 aa16.86■□□□□ 0.29
CTSA-213ENST00000606782 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
CTSA-213ENST00000606782 OGFOD1Q8N543 542 aa16.86■□□□□ 0.29
CTSA-213ENST00000606782 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
CTSA-213ENST00000606782 MXD3Q9BW11 206 aa16.86■□□□□ 0.29
CTSA-213ENST00000606782 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
CTSA-213ENST00000606782 SNAP23O00161 211 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 TAF5LO75529 589 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
CTSA-213ENST00000606782 IL1R1P14778 569 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 KCNJ4P48050 445 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 FKBP1BP68106 108 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 GRM1Q13255 1194 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
CTSA-213ENST00000606782 RGMBQ6NW40 437 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 LDHAL6AQ6ZMR3 332 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 ZBED3Q96IU2 234 aaPredicted RBP16.85■□□□□ 0.29
CTSA-213ENST00000606782 BEGAINQ9BUH8 593 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 CHMP3Q9Y3E7 222 aa16.85■□□□□ 0.29
CTSA-213ENST00000606782 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
CTSA-213ENST00000606782 WNT10BO00744 389 aa16.84■□□□□ 0.29
CTSA-213ENST00000606782 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
CTSA-213ENST00000606782 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
CTSA-213ENST00000606782 HELBQ8NG08 1087 aaPredicted RBP16.84■□□□□ 0.29
CTSA-213ENST00000606782 CCDC102AQ96A19 550 aa16.84■□□□□ 0.29
CTSA-213ENST00000606782 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
CTSA-213ENST00000606782 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
CTSA-213ENST00000606782 FKBP1AP62942 108 aaKnown RBP16.83■□□□□ 0.28
CTSA-213ENST00000606782 GTF2IP78347 998 aa16.83■□□□□ 0.28
CTSA-213ENST00000606782 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
CTSA-213ENST00000606782 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
CTSA-213ENST00000606782 ZIC5Q96T25 663 aa16.82■□□□□ 0.28
CTSA-213ENST00000606782 CNNM1Q9NRU3 951 aa16.82■□□□□ 0.28
CTSA-213ENST00000606782 RIPOR2Q9Y4F9 1068 aa16.82■□□□□ 0.28
CTSA-213ENST00000606782 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
CTSA-213ENST00000606782 UBE4AQ14139 1066 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 TAF7LQ5H9L4 462 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 CERS5Q8N5B7 392 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 ANKRD44Q8N8A2 993 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 HDAC9Q9UKV0 1011 aa16.81■□□□□ 0.28
CTSA-213ENST00000606782 SASH1O94885 1247 aa16.8■□□□□ 0.28
CTSA-213ENST00000606782 ZNF157P51786 506 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms