RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 PTPRCP08575 1304 aa7.42□□□□□ -1.22
FOCAD-213ENST00000604254 RTL9Q8NET4 1388 aa7.42□□□□□ -1.22
FOCAD-213ENST00000604254 SCN9AQ15858 1988 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 POTEFA5A3E0 1075 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 G3V3G9 751 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 H7C1W4 665 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 GRM8O00222 908 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 UFL1O94874 794 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 EPHX2P34913 555 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 IRX5P78411 483 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 KIAA2012Q0VF49 1180 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 WASHC4Q2M389 1173 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 FAM161AQ3B820 660 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 EAPPQ56P03 285 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 MRPL50Q8N5N7 158 aaKnown RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 PDCD7Q8N8D1 485 aaKnown RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 SSH1Q8WYL5 1049 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 ABHD8Q96I13 439 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 TAF1DQ9H5J8 278 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 GREM2Q9H772 168 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 C9orf78Q9NZ63 289 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 ZNRF3Q9ULT6 936 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 COLQQ9Y215 455 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-213ENST00000604254 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
FOCAD-213ENST00000604254 RIMBP2O15034 1052 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 ALDH1L1O75891 902 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 RAD17O75943 681 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 CT47B1P0C2W7 299 aaPredicted RBP7.4□□□□□ -1.22
FOCAD-213ENST00000604254 ITGA6P23229 1130 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 CASP7P55210 303 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 TNIP1Q15025 636 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 ALDH1L2Q3SY69 923 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 CIAPIN1Q6FI81 312 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 LDHDQ86WU2 507 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 TBC1D16Q8TBP0 767 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 PLA2G12BQ9BX93 195 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
FOCAD-213ENST00000604254 POLLQ9UGP5 575 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 XDHP47989 1333 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 CNTNAP1P78357 1384 aa7.4□□□□□ -1.22
FOCAD-213ENST00000604254 ZNF646O15015 1829 aaPredicted RBP7.4□□□□□ -1.23
FOCAD-213ENST00000604254 TRPM7Q96QT4 1865 aa7.4□□□□□ -1.23
FOCAD-213ENST00000604254 CASP8AP2Q9UKL3 1982 aa7.4□□□□□ -1.23
FOCAD-213ENST00000604254 ANKRD18BA2A2Z9 1011 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 ECE2O60344 883 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 POTEJP0CG39 1038 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 SCNN1DP51172 638 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 CXCL9Q07325 125 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 TAF7LQ5H9L4 462 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 PNMA8AQ86V59 439 aaPredicted RBP7.39□□□□□ -1.23
FOCAD-213ENST00000604254 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
FOCAD-213ENST00000604254 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 GPR101Q96P66 508 aaPredicted RBP7.39□□□□□ -1.23
FOCAD-213ENST00000604254 MPHOSPH8Q99549 860 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 DBNDD1Q9H9R9 158 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 BSDC1Q9NW68 430 aaPredicted RBP7.39□□□□□ -1.23
FOCAD-213ENST00000604254 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 METRNQ9UJH8 293 aa7.39□□□□□ -1.23
FOCAD-213ENST00000604254 MED23Q9ULK4 1368 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 KIF16BQ96L93 1317 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 PASKQ96RG2 1323 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 YDJCA8MPS7 323 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 CSF1RP07333 972 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 KCNJ4P48050 445 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 GMPSP49915 693 aaPredicted RBP7.38□□□□□ -1.23
FOCAD-213ENST00000604254 FOXO4P98177 505 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 IFIT5Q13325 482 aaKnown RBP7.38□□□□□ -1.23
FOCAD-213ENST00000604254 DOK7Q18PE1 504 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 CCDC57Q2TAC2 916 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 GPRC5DQ9NZD1 345 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 MKRN1Q9UHC7 482 aaKnown RBP7.38□□□□□ -1.23
FOCAD-213ENST00000604254 MINPP1Q9UNW1 487 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 MYH13Q9UKX3 1938 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 ARAP2Q8WZ64 1704 aa7.38□□□□□ -1.23
FOCAD-213ENST00000604254 PSMD14O00487 310 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 EPS15P42566 896 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 CCT4P50991 539 aaKnown RBP7.37□□□□□ -1.23
FOCAD-213ENST00000604254 LBX1P52954 281 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 IER5LQ5T953 404 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 LMBR1LQ6UX01 489 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 USP50Q70EL3 339 aaPredicted RBP7.37□□□□□ -1.23
FOCAD-213ENST00000604254 SUCLG2Q96I99 432 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 ANKRD2Q9GZV1 360 aa7.37□□□□□ -1.23
FOCAD-213ENST00000604254 ADARB2Q9NS39 739 aaKnown RBP7.37□□□□□ -1.23
FOCAD-213ENST00000604254 ZNF804BA4D1E1 1349 aa7.36□□□□□ -1.23
FOCAD-213ENST00000604254 UTYO14607 1347 aa7.36□□□□□ -1.23
FOCAD-213ENST00000604254 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
FOCAD-213ENST00000604254 NBPF7P0C2Y1 421 aaPredicted RBP7.36□□□□□ -1.23
FOCAD-213ENST00000604254 VEGFBP49765 207 aa7.36□□□□□ -1.23
FOCAD-213ENST00000604254 MAP2K1Q02750 393 aaPredicted RBP7.36□□□□□ -1.23
FOCAD-213ENST00000604254 CHRNDQ07001 517 aa7.36□□□□□ -1.23
FOCAD-213ENST00000604254 EPHA10Q5JZY3 1008 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms