RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CIB2O75838 187 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 ALDH3A1P30838 453 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 IFIT1BQ5T764 474 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 STMN2Q93045 179 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 UTP14AQ9BVJ6 771 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 TUBBP07437 444 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 MTRF1LQ9UGC7 380 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 CFAP157Q5JU67 520 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 CTTNBP2Q8WZ74 1663 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 F13A1P00488 732 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 TPD52P55327 224 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 ANKLE2Q86XL3 938 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 MPHOSPH6Q99547 160 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 RASSF4Q9H2L5 321 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 C10orf67Q8IYJ2 551 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 DACT1Q9NYF0 836 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 MIPOL1Q8TD10 442 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 NESP48681 1621 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 POGZQ7Z3K3 1410 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 SMC1BQ8NDV3 1235 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 BRF1Q92994 677 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 OGFRQ9NZT2 677 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 ODF2LQ9ULJ1 636 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 PPP1R7Q15435 360 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 TRIM7Q9C029 511 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 ATP11AP98196 1134 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 CCDC14Q49A88 953 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 SEC62Q99442 399 aaKnown RBP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 KCNK9Q9NPC2 374 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 STX8Q9UNK0 236 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 ZFYP08048 801 aaPredicted RBP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 Q6ZUG5 572 aa10.86□□□□□ -0.67
CSMD1-217ENST00000602723 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 RPUSD2Q8IZ73 545 aaKnown RBP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 UBLCP1Q8WVY7 318 aaPredicted RBP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.86□□□□□ -0.67
CSMD1-217ENST00000602723 IMPG2Q9BZV3 1241 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 ZNF569Q5MCW4 686 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 ESR2Q92731 530 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 SPTLC2O15270 562 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 TERF1P54274 439 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 TNNC1P63316 161 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 ZNF354CQ86Y25 554 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 ARFGAP2Q8N6H7 521 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 GSTO1P78417 241 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 PLCB3Q01970 1234 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 CNGA4Q8IV77 575 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 CCDC110Q8TBZ0 833 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 ZBTB9Q96C00 473 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 NKIRAS1Q9NYS0 192 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 GPTP24298 496 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 PPP2R3AQ06190 1150 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 IFNKQ9P0W0 207 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 TXNDC16Q9P2K2 825 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 RTL9Q8NET4 1388 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 HPDP32754 393 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-217ENST00000602723 INTS8Q75QN2 995 aaKnown RBP10.85□□□□□ -0.67
CSMD1-217ENST00000602723 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 ATP6V0A2Q9Y487 856 aa10.85□□□□□ -0.67
CSMD1-217ENST00000602723 SCAF11Q99590 1463 aaKnown RBP10.84□□□□□ -0.67
CSMD1-217ENST00000602723 IGHDP01880 384 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 TRIM75PA6NK02 468 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 NME9Q86XW9 330 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 KIAA1524Q8TCG1 905 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 IL16Q14005 1332 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 GMNNO75496 209 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 SNX21Q969T3 373 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 NDC80O14777 642 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 A0A1B0GUL7 405 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 ATP5DP30049 168 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
CSMD1-217ENST00000602723 C6orf229H3BNL8 230 aa10.84□□□□□ -0.67
CSMD1-217ENST00000602723 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.67
CSMD1-217ENST00000602723 NAPAP54920 295 aa10.83□□□□□ -0.67
CSMD1-217ENST00000602723 ESYT1Q9BSJ8 1104 aa10.83□□□□□ -0.67
CSMD1-217ENST00000602723 KIF3CO14782 793 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 DHX58Q96C10 678 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 A0A1B0GUA9 196 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 LDHCP07864 332 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
CSMD1-217ENST00000602723 TCEANC2Q96MN5 208 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 GBP1P32455 592 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 PI4KAP2A4QPH2 592 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 RAB3GAP1Q15042 981 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 KRBA2Q6ZNG9 492 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 PI4KAP1Q8N8J0 262 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 ANKRD24Q8TF21 1146 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 235.4 ms