RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 MYO1CO00159 1063 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 PI16Q6UXB8 463 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 SEC62Q99442 399 aaKnown RBP17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 NIP7Q9Y221 180 aaKnown RBP eCLIP17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 TAF5LO75529 589 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 GPATCH3Q96I76 525 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 ECHDC1Q9NTX5 307 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 CLIP2Q9UDT6 1046 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 SPATA31A1Q5TZJ5 1347 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 GOLIM4O00461 696 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 TPM4P67936 248 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
PPFIA3-206ENST00000602655 CHMLP26374 656 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 ITPK1Q13572 414 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 LDHAL6AQ6ZMR3 332 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 CHRM1P11229 460 aaPredicted RBP17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 UBE2HP62256 183 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 ZSCAN26Q16670 478 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 TXLNBQ8N3L3 684 aa17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 ZCCHC17Q9NP64 241 aaKnown RBP17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 PTPN12Q05209 780 aaKnown RBP17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
PPFIA3-206ENST00000602655 SLU7O95391 586 aaKnown RBP17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 SART3Q15020 963 aaKnown RBP17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 CASQ1P31415 396 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 LMAN1P49257 510 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 ICE2Q659A1 982 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 TMCO3Q6UWJ1 677 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 MYCBPQ99417 103 aaPredicted RBP17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 DEF6Q9H4E7 631 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 VPS37CA5D8V6 355 aaPredicted RBP17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 RAB11FIP3O75154 756 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 POLA2Q14181 598 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 E2F4Q16254 413 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 GREM2Q9H772 168 aa17.92■□□□□ 0.46
PPFIA3-206ENST00000602655 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 TRPM3Q9HCF6 1732 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 IFIT5Q13325 482 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 SEC31BQ9NQW1 1179 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 GEMIN8Q9NWZ8 242 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 GNPATO15228 680 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 GNL2Q13823 731 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 LRP10Q7Z4F1 713 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 CEP126Q9P2H0 1117 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 LCMT1Q9UIC8 334 aa17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-206ENST00000602655 MCM2P49736 904 aa17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 ARHGAP29Q52LW3 1261 aa17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 ADORA1P30542 326 aa17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 FOSBP53539 338 aa17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 CNPY4Q8N129 248 aa17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 CACTINQ8WUQ7 758 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
PPFIA3-206ENST00000602655 HOMER1Q86YM7 354 aa17.89■□□□□ 0.46
PPFIA3-206ENST00000602655 NCAPD2Q15021 1401 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 KIF1AQ12756 1690 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 ST5P78524 1137 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 FAM200AQ8TCP9 573 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 CCDC34Q96HJ3 373 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 GOLGA6L19H0YKK7 550 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 FBXW7Q969H0 707 aa17.89■□□□□ 0.45
PPFIA3-206ENST00000602655 USP27XA6NNY8 438 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 SKILP12757 684 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 LRRC2Q9BYS8 371 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 QTRT2Q9H974 415 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 AFF2P51816 1311 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 WTIPA6NIX2 430 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 ITGA6P23229 1130 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 ATP6V1DQ9Y5K8 247 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 UBXN4Q92575 508 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 SMC3Q9UQE7 1217 aa17.88■□□□□ 0.45
PPFIA3-206ENST00000602655 TRIM37O94972 964 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 PTH1RQ03431 593 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 STK3Q13188 491 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 ARID5BQ14865 1188 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 NKX1-1Q15270 411 aaPredicted RBP17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 ANO6Q4KMQ2 910 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 TNNI3KQ59H18 835 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 FPGT-TNNI3KV9GXZ4 949 aa17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 DNM1Q05193 864 aaKnown RBP17.87■□□□□ 0.45
PPFIA3-206ENST00000602655 CTR9Q6PD62 1173 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms