RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 GTF3C6Q969F1 213 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 PTPDC1A2A3K4 754 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 CPLX1O14810 134 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 GIGYF2Q6Y7W6 1299 aaKnown RBP13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 GJB4Q9NTQ9 266 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 MAP3K15Q6ZN16 1313 aa13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 A0A087WWV3 80 aa13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 DDB1Q16531 1140 aa13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 ZMYM1Q5SVZ6 1142 aa13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 ERCC4Q92889 916 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
ARHGEF1-220ENST00000600274 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 PHKA1P46020 1223 aa13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 IMMTQ16891 758 aaKnown RBP13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 FAM182BQ5T319 152 aa13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 TTLL11Q8NHH1 800 aa13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 INCENPQ9NQS7 918 aa13.58□□□□□ -0.23
ARHGEF1-220ENST00000600274 NPHP1O15259 732 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 GPAA1O43292 621 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 NKX1-1Q15270 411 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 DRC7Q8IY82 874 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 TNMDQ9H2S6 317 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 ADCY5O95622 1261 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 FGAP02671 866 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 CTSWP56202 376 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 C17orf53Q8N3J3 647 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 ZHX1Q9UKY1 873 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
ARHGEF1-220ENST00000600274 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 MCAMP43121 646 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 ZNF213O14771 459 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 CYP19A1P11511 503 aaPredicted RBP13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 KCNB2Q92953 911 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 ABCF2Q9UG63 623 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 PRC1O43663 620 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 TRDNQ13061 729 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
ARHGEF1-220ENST00000600274 ME1P48163 572 aa13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 UQCRHLA0A096LP55 91 aa13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 KCNQ2O43526 872 aa13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 UQCRHP07919 91 aa13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 MYL10Q9BUA6 226 aa13.56□□□□□ -0.24
ARHGEF1-220ENST00000600274 GNL2Q13823 731 aaKnown RBP13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 LRRFIP1Q32MZ4 808 aaKnown RBP13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 NR1I2O75469 434 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 MAP3K11Q16584 847 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 USPL1Q5W0Q7 1092 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 LUZP1Q86V48 1076 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 MICU3Q86XE3 530 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.245e-7■■■■□ 19.7
ARHGEF1-220ENST00000600274 SH3TC1Q8TE82 1336 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
ARHGEF1-220ENST00000600274 CCDC192P0DO97 292 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 SLC4A8Q2Y0W8 1093 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 SCAND2PQ9GZW5 306 aaPredicted RBP13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 PIH1D3Q9NQM4 214 aaKnown RBP13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 JAG2Q9Y219 1238 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 CIAO1O76071 339 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 CCDC102BQ68D86 513 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 NSUN7Q8NE18 718 aaKnown RBP13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 ZNF532Q9HCE3 1301 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 TSC1Q92574 1164 aa13.54□□□□□ -0.24
ARHGEF1-220ENST00000600274 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 B4E1Z4 1266 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 FAM98CQ17RN3 349 aaKnown RBP13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 APPBP2Q92624 585 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 CTNNA3Q9UI47 895 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms