RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	HSP90AB4P	Q58FF6	505 aa		27.12	■■□□□ 1.93
LTBP4-227	ENST00000600026	CEP126	Q9P2H0	1117 aa		27.12	■■□□□ 1.93
LTBP4-227	ENST00000600026	EXOC6B	Q9Y2D4	811 aa		27.12	■■□□□ 1.93
LTBP4-227	ENST00000600026	OS9	Q13438	667 aa	Predicted RBP	27.11	■■□□□ 1.93
LTBP4-227	ENST00000600026	NIM1K	Q8IY84	436 aa		27.11	■■□□□ 1.93
LTBP4-227	ENST00000600026	GCC1	Q96CN9	775 aa		27.11	■■□□□ 1.93
LTBP4-227	ENST00000600026	DCTPP1	Q9H773	170 aa		27.11	■■□□□ 1.93
LTBP4-227	ENST00000600026	SASH1	O94885	1247 aa		27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	TFCP2	Q12800	502 aa		27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	PUM3	Q15397	648 aa	Known RBP	27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	TXNRD3	Q86VQ6	643 aa		27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	JDP2	Q8WYK2	163 aa		27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	PSME4	Q14997	1843 aa		27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.1	■■□□□ 1.93
LTBP4-227	ENST00000600026	SCN9A	Q15858	1988 aa		27.09	■■□□□ 1.93
LTBP4-227	ENST00000600026	FGFR2	P21802	821 aa		27.09	■■□□□ 1.93
LTBP4-227	ENST00000600026	C15orf52	Q6ZUT6	534 aa	Known RBP	27.09	■■□□□ 1.93
LTBP4-227	ENST00000600026	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.09	■■□□□ 1.93
LTBP4-227	ENST00000600026	DOK7	Q18PE1	504 aa		27.08	■■□□□ 1.93
LTBP4-227	ENST00000600026	DBNDD1	Q9H9R9	158 aa		27.08	■■□□□ 1.93
LTBP4-227	ENST00000600026	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.08	■■□□□ 1.93
LTBP4-227	ENST00000600026	ZNF609	O15014	1411 aa		27.07	■■□□□ 1.92
LTBP4-227	ENST00000600026	RAB11FIP3	O75154	756 aa		27.07	■■□□□ 1.92
LTBP4-227	ENST00000600026	ATP2B3	Q16720	1220 aa		27.07	■■□□□ 1.92
LTBP4-227	ENST00000600026	ZNF646	O15015	1829 aa	Predicted RBP	27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026	FZD9	O00144	591 aa		27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026	ECE2	O60344	883 aa		27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026	SLC5A1	P13866	664 aa		27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026	ERC1	Q8IUD2	1116 aa		27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026	SMC5	Q8IY18	1101 aa		27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026	ZNRF3	Q9ULT6	936 aa		27.06	■■□□□ 1.92
LTBP4-227	ENST00000600026		G3V3G9	751 aa		27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	IFIT1	P09914	478 aa	Known RBP	27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	DCAF8	Q5TAQ9	597 aa		27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	ZNF526	Q8TF50	670 aa	Predicted RBP	27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	LPIN2	Q92539	896 aa		27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	ZBTB47	Q9UFB7	747 aa	Predicted RBP	27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	MYH13	Q9UKX3	1938 aa		27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	KDM2B	Q8NHM5	1336 aa		27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	ZNF541	Q9H0D2	1346 aa		27.05	■■□□□ 1.92
LTBP4-227	ENST00000600026	YDJC	A8MPS7	323 aa		27.04	■■□□□ 1.92
LTBP4-227	ENST00000600026	COA1	Q9GZY4	146 aa		27.04	■■□□□ 1.92
LTBP4-227	ENST00000600026	AKAP2	Q9Y2D5	859 aa		27.04	■■□□□ 1.92
LTBP4-227	ENST00000600026		A0A1B0GUL7	405 aa		27.02	■■□□□ 1.92
LTBP4-227	ENST00000600026	APBB1	O00213	710 aa		27.02	■■□□□ 1.92
LTBP4-227	ENST00000600026	GYG1	P46976	350 aa		27.02	■■□□□ 1.92
LTBP4-227	ENST00000600026	EIF6	P56537	245 aa	Known RBP	27.02	■■□□□ 1.92
LTBP4-227	ENST00000600026	ZNF804A	Q7Z570	1209 aa		27.02	■■□□□ 1.92
LTBP4-227	ENST00000600026	RHPN1	Q8TCX5	695 aa		27.02	■■□□□ 1.92
LTBP4-227	ENST00000600026	KIF1BP	Q96EK5	621 aa		27.01	■■□□□ 1.91
LTBP4-227	ENST00000600026	FAM84B	Q96KN1	310 aa	Predicted RBP	27.01	■■□□□ 1.91
LTBP4-227	ENST00000600026	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.01	■■□□□ 1.91
LTBP4-227	ENST00000600026	GPR108	Q9NPR9	543 aa		27.01	■■□□□ 1.91
LTBP4-227	ENST00000600026	HSPA6	P17066	643 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	ADORA1	P30542	326 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	TIMM10	P62072	90 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	TNNI3K	Q59H18	835 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	PODN	Q7Z5L7	613 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	LRRCC1	Q9C099	1032 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	CD209	Q9NNX6	404 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	FPGT-TNNI3K	V9GXZ4	949 aa		27	■■□□□ 1.91
LTBP4-227	ENST00000600026	HIBADH	P31937	336 aa	Known RBP	26.99	■■□□□ 1.91
LTBP4-227	ENST00000600026	CXCL9	Q07325	125 aa		26.99	■■□□□ 1.91
LTBP4-227	ENST00000600026	ANKRD45	Q5TZF3	282 aa		26.99	■■□□□ 1.91
LTBP4-227	ENST00000600026	FBXO33	Q7Z6M2	555 aa		26.99	■■□□□ 1.91
LTBP4-227	ENST00000600026	RAD17	O75943	681 aa		26.98	■■□□□ 1.91
LTBP4-227	ENST00000600026	CAVIN4	Q5BKX8	364 aa		26.98	■■□□□ 1.91
LTBP4-227	ENST00000600026	NEUROD6	Q96NK8	337 aa		26.98	■■□□□ 1.91
LTBP4-227	ENST00000600026	KCNQ5	Q9NR82	932 aa		26.98	■■□□□ 1.91
LTBP4-227	ENST00000600026	WDR90	Q96KV7	1748 aa		26.98	■■□□□ 1.91
LTBP4-227	ENST00000600026	GLTPD2	A6NH11	291 aa		26.97	■■□□□ 1.91
LTBP4-227	ENST00000600026	IL1R1	P14778	569 aa		26.97	■■□□□ 1.91
LTBP4-227	ENST00000600026	BCAM	P50895	628 aa		26.97	■■□□□ 1.91
LTBP4-227	ENST00000600026	CIAPIN1	Q6FI81	312 aa		26.97	■■□□□ 1.91
LTBP4-227	ENST00000600026	XAGE2	Q96GT9	111 aa		26.97	■■□□□ 1.91
LTBP4-227	ENST00000600026	IL1RAPL2	Q9NP60	686 aa		26.97	■■□□□ 1.91
LTBP4-227	ENST00000600026	VPS37D	Q86XT2	251 aa		26.96	■■□□□ 1.91
LTBP4-227	ENST00000600026	GJA3	Q9Y6H8	435 aa		26.96	■■□□□ 1.91
LTBP4-227	ENST00000600026	DDN	O94850	711 aa	Predicted RBP	26.95	■■□□□ 1.9
LTBP4-227	ENST00000600026	NUCB1	Q02818	461 aa		26.95	■■□□□ 1.9
LTBP4-227	ENST00000600026	DPY19L2	Q6NUT2	758 aa		26.95	■■□□□ 1.9
LTBP4-227	ENST00000600026	GPC2	Q8N158	579 aa		26.95	■■□□□ 1.9
LTBP4-227	ENST00000600026	EAF2	Q96CJ1	260 aa	Predicted RBP	26.95	■■□□□ 1.9
LTBP4-227	ENST00000600026	PSMD14	O00487	310 aa		26.94	■■□□□ 1.9
LTBP4-227	ENST00000600026	TDRD7	Q8NHU6	1098 aa	Known RBP	26.94	■■□□□ 1.9
LTBP4-227	ENST00000600026	SMARCA5	O60264	1052 aa	Predicted RBP	26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	PHKA1	P46020	1223 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	TNIP1	Q15025	636 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	CCDC102B	Q68D86	513 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	AACS	Q86V21	672 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	CHD1L	Q86WJ1	897 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	CLASRP	Q8N2M8	674 aa	Known RBP	26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	FBXW7	Q969H0	707 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	DBNDD2	Q9BQY9	259 aa		26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	CCDC8	Q9H0W5	538 aa	Predicted RBP	26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	26.93	■■□□□ 1.9
LTBP4-227	ENST00000600026	USP17L3	A6NCW0	530 aa		26.92	■■□□□ 1.9
LTBP4-227	ENST00000600026	USP17L4	A6NCW7	530 aa		26.92	■■□□□ 1.9
LTBP4-227	ENST00000600026	USP17L1	Q7RTZ2	530 aa		26.92	■■□□□ 1.9
LTBP4-227	ENST00000600026	BCL11A	Q9H165	835 aa		26.92	■■□□□ 1.9

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