RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 RPS12P25398 132 aaKnown RBP35.21■■■■□ 3.23
SSBP4-206ENST00000599699 METTL24Q5JXM2 366 aa35.21■■■■□ 3.23
SSBP4-206ENST00000599699 USP50Q70EL3 339 aaPredicted RBP35.21■■■■□ 3.23
SSBP4-206ENST00000599699 USP17L3A6NCW0 530 aa35.2■■■■□ 3.23
SSBP4-206ENST00000599699 USP17L4A6NCW7 530 aa35.2■■■■□ 3.23
SSBP4-206ENST00000599699 USP17L1Q7RTZ2 530 aa35.2■■■■□ 3.23
SSBP4-206ENST00000599699 MICALL2Q8IY33 904 aa35.2■■■■□ 3.23
SSBP4-206ENST00000599699 DPF2Q92785 391 aa35.2■■■■□ 3.23
SSBP4-206ENST00000599699 YTHDC1Q96MU7 727 aaKnown RBP35.2■■■■□ 3.23
SSBP4-206ENST00000599699 RCAN3Q9UKA8 241 aa35.2■■■■□ 3.23
SSBP4-206ENST00000599699 RFX5P48382 616 aaPredicted RBP35.19■■■■□ 3.22
SSBP4-206ENST00000599699 ITPRIPQ8IWB1 547 aa35.19■■■■□ 3.22
SSBP4-206ENST00000599699 GNAI2P04899 355 aa35.18■■■■□ 3.22
SSBP4-206ENST00000599699 SHTN1A0MZ66 631 aa35.17■■■■□ 3.22
SSBP4-206ENST00000599699 APLP1P51693 650 aa35.17■■■■□ 3.22
SSBP4-206ENST00000599699 PTPN12Q05209 780 aaKnown RBP35.17■■■■□ 3.22
SSBP4-206ENST00000599699 UBE4AQ14139 1066 aa35.17■■■■□ 3.22
SSBP4-206ENST00000599699 RSBN1LQ6PCB5 846 aaPredicted RBP35.17■■■■□ 3.22
SSBP4-206ENST00000599699 C15orf52Q6ZUT6 534 aaKnown RBP35.17■■■■□ 3.22
SSBP4-206ENST00000599699 ZNF804AQ7Z570 1209 aa35.17■■■■□ 3.22
SSBP4-206ENST00000599699 SCN9AQ15858 1988 aa35.16■■■■□ 3.22
SSBP4-206ENST00000599699 RLBP1P12271 317 aa35.16■■■■□ 3.22
SSBP4-206ENST00000599699 SIL1Q9H173 461 aa35.16■■■■□ 3.22
SSBP4-206ENST00000599699 EYA2O00167 538 aa35.15■■■■□ 3.22
SSBP4-206ENST00000599699 MAP1SQ66K74 1059 aaPredicted RBP35.15■■■■□ 3.22
SSBP4-206ENST00000599699 CD209Q9NNX6 404 aa35.15■■■■□ 3.22
SSBP4-206ENST00000599699 IRS2Q9Y4H2 1338 aa35.14■■■■□ 3.22
SSBP4-206ENST00000599699 A0A1B0GUL6 1792 aa35.14■■■■□ 3.22
SSBP4-206ENST00000599699 AGBL3Q8NEM8 1001 aa35.13■■■■□ 3.21
SSBP4-206ENST00000599699 SRGAP3O43295 1099 aa35.12■■■■□ 3.21
SSBP4-206ENST00000599699 MS4A1P11836 297 aa35.12■■■■□ 3.21
SSBP4-206ENST00000599699 STRIP1Q5VSL9 837 aa35.12■■■■□ 3.21
SSBP4-206ENST00000599699 CNTROBQ8N137 903 aa35.12■■■■□ 3.21
SSBP4-206ENST00000599699 PANK1Q8TE04 598 aa35.12■■■■□ 3.21
SSBP4-206ENST00000599699 PDE8BO95263 885 aa35.11■■■■□ 3.21
SSBP4-206ENST00000599699 RBM26Q5T8P6 1007 aaKnown RBP35.11■■■■□ 3.21
SSBP4-206ENST00000599699 TTLL5Q6EMB2 1281 aa35.11■■■■□ 3.21
SSBP4-206ENST00000599699 SAMD7Q7Z3H4 446 aa35.11■■■■□ 3.21
SSBP4-206ENST00000599699 TRPM4Q8TD43 1214 aa35.11■■■■□ 3.21
SSBP4-206ENST00000599699 GTF2IP78347 998 aa35.1■■■■□ 3.21
SSBP4-206ENST00000599699 TBC1D10BQ4KMP7 808 aaPredicted RBP35.1■■■■□ 3.21
SSBP4-206ENST00000599699 DACT2Q5SW24 774 aa35.1■■■■□ 3.21
SSBP4-206ENST00000599699 PA2G4Q9UQ80 394 aaKnown RBP35.1■■■■□ 3.21
SSBP4-206ENST00000599699 VGLL2Q8N8G2 317 aa35.09■■■■□ 3.21
SSBP4-206ENST00000599699 MXD3Q9BW11 206 aa35.09■■■■□ 3.21
SSBP4-206ENST00000599699 FBXO3Q9UK99 471 aa35.09■■■■□ 3.21
SSBP4-206ENST00000599699 ADAMTSL1Q8N6G6 1762 aa35.09■■■■□ 3.21
SSBP4-206ENST00000599699 GYG1P46976 350 aa35.08■■■■□ 3.21
SSBP4-206ENST00000599699 HIRAP54198 1017 aaPredicted RBP35.08■■■■□ 3.21
SSBP4-206ENST00000599699 ATG9AQ7Z3C6 839 aa35.08■■■■□ 3.21
SSBP4-206ENST00000599699 CIAO1O76071 339 aa35.07■■■■□ 3.2
SSBP4-206ENST00000599699 USP17L8P0C7I0 530 aa35.07■■■■□ 3.2
SSBP4-206ENST00000599699 HIBADHP31937 336 aaKnown RBP35.07■■■■□ 3.2
SSBP4-206ENST00000599699 MTX1Q13505 466 aa35.07■■■■□ 3.2
SSBP4-206ENST00000599699 PUM3Q15397 648 aaKnown RBP35.07■■■■□ 3.2
SSBP4-206ENST00000599699 VPS37DQ86XT2 251 aa35.07■■■■□ 3.2
SSBP4-206ENST00000599699 GMLQ99445 158 aa35.07■■■■□ 3.2
SSBP4-206ENST00000599699 COPRSQ9NQ92 184 aa35.07■■■■□ 3.2
SSBP4-206ENST00000599699 ITGBL1O95965 494 aaPredicted RBP35.06■■■■□ 3.2
SSBP4-206ENST00000599699 IL1R1P14778 569 aa35.06■■■■□ 3.2
SSBP4-206ENST00000599699 HTRA3P83110 453 aa35.06■■■■□ 3.2
SSBP4-206ENST00000599699 CEP126Q9P2H0 1117 aa35.06■■■■□ 3.2
SSBP4-206ENST00000599699 MYO3BQ8WXR4 1341 aa35.06■■■■□ 3.2
SSBP4-206ENST00000599699 IL15P40933 162 aaPredicted RBP35.05■■■■□ 3.2
SSBP4-206ENST00000599699 FAM84BQ96KN1 310 aaPredicted RBP35.05■■■■□ 3.2
SSBP4-206ENST00000599699 ZNF609O15014 1411 aa35.05■■■■□ 3.2
SSBP4-206ENST00000599699 PSME4Q14997 1843 aa35.04■■■■□ 3.2
SSBP4-206ENST00000599699 ZBTB7BO15156 539 aaPredicted RBP35.04■■■■□ 3.2
SSBP4-206ENST00000599699 EGFRP00533 1210 aa35.04■■■■□ 3.2
SSBP4-206ENST00000599699 IFIT1P09914 478 aaKnown RBP35.04■■■■□ 3.2
SSBP4-206ENST00000599699 KIF4BQ2VIQ3 1234 aa35.04■■■■□ 3.2
SSBP4-206ENST00000599699 CAVIN4Q5BKX8 364 aa35.04■■■■□ 3.2
SSBP4-206ENST00000599699 ZC3H15Q8WU90 426 aaKnown RBP35.04■■■■□ 3.2
SSBP4-206ENST00000599699 C1orf115Q9H7X2 142 aa35.04■■■■□ 3.2
SSBP4-206ENST00000599699 ZNF280AP59817 542 aaPredicted RBP35.03■■■■□ 3.2
SSBP4-206ENST00000599699 OGFOD1Q8N543 542 aa35.03■■■■□ 3.2
SSBP4-206ENST00000599699 PASKQ96RG2 1323 aa35.03■■■■□ 3.2
SSBP4-206ENST00000599699 SLC5A1P13866 664 aa35.02■■■■□ 3.2
SSBP4-206ENST00000599699 JAG2Q9Y219 1238 aa35.02■■■■□ 3.2
SSBP4-206ENST00000599699 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.01■■■■□ 3.2
SSBP4-206ENST00000599699 CEP350Q5VT06 3117 aa35.01■■■■□ 3.19
SSBP4-206ENST00000599699 PNMA6EA0A0J9YXQ4 647 aa35■■■■□ 3.19
SSBP4-206ENST00000599699 LPIN2Q92539 896 aa35■■■■□ 3.19
SSBP4-206ENST00000599699 MYOZ2Q9NPC6 264 aa35■■■■□ 3.19
SSBP4-206ENST00000599699 PGAP2Q9UHJ9 254 aa35■■■■□ 3.19
SSBP4-206ENST00000599699 FRAT2O75474 233 aaPredicted RBP34.99■■■■□ 3.19
SSBP4-206ENST00000599699 SASH1O94885 1247 aa34.99■■■■□ 3.19
SSBP4-206ENST00000599699 FGFR2P21802 821 aa34.99■■■■□ 3.19
SSBP4-206ENST00000599699 FBXO33Q7Z6M2 555 aa34.99■■■■□ 3.19
SSBP4-206ENST00000599699 KIAA0825Q8IV33 1275 aa34.99■■■■□ 3.19
SSBP4-206ENST00000599699 TDRD7Q8NHU6 1098 aaKnown RBP34.99■■■■□ 3.19
SSBP4-206ENST00000599699 ATP2B3Q16720 1220 aa34.98■■■■□ 3.19
SSBP4-206ENST00000599699 IQSEC3Q9UPP2 1182 aaPredicted RBP34.98■■■■□ 3.19
SSBP4-206ENST00000599699 BCAMP50895 628 aa34.97■■■■□ 3.19
SSBP4-206ENST00000599699 MVPQ14764 893 aaKnown RBP34.97■■■■□ 3.19
SSBP4-206ENST00000599699 HDAC9Q9UKV0 1011 aa34.97■■■■□ 3.19
SSBP4-206ENST00000599699 COG6Q9Y2V7 657 aa34.97■■■■□ 3.19
SSBP4-206ENST00000599699 TRAF5O00463 557 aa34.96■■■■□ 3.19
SSBP4-206ENST00000599699 GLIS2Q9BZE0 524 aaPredicted RBP34.96■■■■□ 3.19
SSBP4-206ENST00000599699 ATP8B2P98198 1209 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms