RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GREM2Q9H772 168 aa27.15■■□□□ 1.94
PNKP-212ENST00000599454 NEURL1BA8MQ27 555 aa27.14■■□□□ 1.94
PNKP-212ENST00000599454 TSR2Q969E8 191 aaKnown RBP27.14■■□□□ 1.94
PNKP-212ENST00000599454 MYO3BQ8WXR4 1341 aa27.14■■□□□ 1.93
PNKP-212ENST00000599454 CCT4P50991 539 aaKnown RBP27.13■■□□□ 1.93
PNKP-212ENST00000599454 TWISTNBQ3B726 338 aaPredicted RBP27.13■■□□□ 1.93
PNKP-212ENST00000599454 H7C1W4 665 aa27.12■■□□□ 1.93
PNKP-212ENST00000599454 MMP14P50281 582 aa27.12■■□□□ 1.93
PNKP-212ENST00000599454 CWF19L2Q2TBE0 894 aaKnown RBP27.12■■□□□ 1.93
PNKP-212ENST00000599454 RNF186Q9NXI6 227 aa27.12■■□□□ 1.93
PNKP-212ENST00000599454 LEMD3Q9Y2U8 911 aa27.12■■□□□ 1.93
PNKP-212ENST00000599454 IGHMBP2P38935 993 aaKnown RBP27.11■■□□□ 1.93
PNKP-212ENST00000599454 UBE3BQ7Z3V4 1068 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 RASAL3Q86YV0 1011 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 OGFOD1Q8N543 542 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 CSRNP1Q96S65 589 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 PLA2G12BQ9BX93 195 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 COA1Q9GZY4 146 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 IL16Q14005 1332 aa27.11■■□□□ 1.93
PNKP-212ENST00000599454 TRPA1O75762 1119 aa27.1■■□□□ 1.93
PNKP-212ENST00000599454 NCBP3Q53F19 620 aaKnown RBP27.1■■□□□ 1.93
PNKP-212ENST00000599454 DACT2Q5SW24 774 aa27.1■■□□□ 1.93
PNKP-212ENST00000599454 STRIP1Q5VSL9 837 aa27.1■■□□□ 1.93
PNKP-212ENST00000599454 WWC1Q8IX03 1113 aa27.1■■□□□ 1.93
PNKP-212ENST00000599454 SLC4A2P04920 1241 aa27.09■■□□□ 1.93
PNKP-212ENST00000599454 ANKRD2Q9GZV1 360 aa27.09■■□□□ 1.93
PNKP-212ENST00000599454 G2E3Q7L622 706 aa27.08■■□□□ 1.93
PNKP-212ENST00000599454 WTIPA6NIX2 430 aaPredicted RBP27.07■■□□□ 1.92
PNKP-212ENST00000599454 GCKRQ14397 625 aa27.07■■□□□ 1.92
PNKP-212ENST00000599454 MYH16Q9H6N6 1097 aa27.07■■□□□ 1.92
PNKP-212ENST00000599454 PDE4DIPQ5VU43 2346 aa27.07■■□□□ 1.92
PNKP-212ENST00000599454 FLIIQ13045 1269 aa27.06■■□□□ 1.92
PNKP-212ENST00000599454 NBPF9Q3BBW0 867 aa27.06■■□□□ 1.92
PNKP-212ENST00000599454 ZNF804BA4D1E1 1349 aa27.06■■□□□ 1.92
PNKP-212ENST00000599454 ITGA6P23229 1130 aa27.05■■□□□ 1.92
PNKP-212ENST00000599454 NF2P35240 595 aa27.05■■□□□ 1.92
PNKP-212ENST00000599454 FBXW7Q969H0 707 aa27.05■■□□□ 1.92
PNKP-212ENST00000599454 MPHOSPH8Q99549 860 aa27.05■■□□□ 1.92
PNKP-212ENST00000599454 A0A1B0GUL6 1792 aa27.04■■□□□ 1.92
PNKP-212ENST00000599454 WNT10BO00744 389 aa27.04■■□□□ 1.92
PNKP-212ENST00000599454 ECM29Q5VYK3 1845 aa27.04■■□□□ 1.92
PNKP-212ENST00000599454 CSF1RP07333 972 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 CASP7P55210 303 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 FKBP5Q13451 457 aaPredicted RBP27.03■■□□□ 1.92
PNKP-212ENST00000599454 TTLL5Q6EMB2 1281 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 TXNRD3Q86VQ6 643 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 LINS1Q8NG48 757 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 DNAAF4Q8WXU2 420 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 MXD3Q9BW11 206 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 HDAC9Q9UKV0 1011 aa27.03■■□□□ 1.92
PNKP-212ENST00000599454 CCDC184Q52MB2 194 aa27.02■■□□□ 1.92
PNKP-212ENST00000599454 CTU1Q7Z7A3 348 aaKnown RBP27.01■■□□□ 1.91
PNKP-212ENST00000599454 APOBEC3FQ8IUX4 373 aaKnown RBP27.01■■□□□ 1.91
PNKP-212ENST00000599454 UBE2Q2LH0YL09 131 aa27■■□□□ 1.91
PNKP-212ENST00000599454 KCNJ4P48050 445 aa27■■□□□ 1.91
PNKP-212ENST00000599454 TTLL12Q14166 644 aaPredicted RBP27■■□□□ 1.91
PNKP-212ENST00000599454 MOB2Q70IA6 237 aa27■■□□□ 1.91
PNKP-212ENST00000599454 SCAF8Q9UPN6 1271 aaKnown RBP27■■□□□ 1.91
PNKP-212ENST00000599454 PRAMEF18Q5VWM3 479 aa26.99■■□□□ 1.91
PNKP-212ENST00000599454 FANCIQ9NVI1 1328 aa26.98■■□□□ 1.91
PNKP-212ENST00000599454 ANKRD18BA2A2Z9 1011 aa26.98■■□□□ 1.91
PNKP-212ENST00000599454 CHRNDQ07001 517 aa26.98■■□□□ 1.91
PNKP-212ENST00000599454 COL1A1P02452 1464 aaPredicted RBP26.98■■□□□ 1.91
PNKP-212ENST00000599454 SASH1O94885 1247 aa26.97■■□□□ 1.91
PNKP-212ENST00000599454 KLRK1P26718 216 aa26.97■■□□□ 1.91
PNKP-212ENST00000599454 GTF2IP78347 998 aa26.97■■□□□ 1.91
PNKP-212ENST00000599454 KIAA0825Q8IV33 1275 aa26.97■■□□□ 1.91
PNKP-212ENST00000599454 SLC34A2O95436 690 aa26.96■■□□□ 1.91
PNKP-212ENST00000599454 TM4SF4P48230 202 aa26.96■■□□□ 1.91
PNKP-212ENST00000599454 C15orf52Q6ZUT6 534 aaKnown RBP26.96■■□□□ 1.91
PNKP-212ENST00000599454 ARMC9Q7Z3E5 817 aa26.96■■□□□ 1.91
PNKP-212ENST00000599454 WDR63Q8IWG1 891 aa26.96■■□□□ 1.91
PNKP-212ENST00000599454 ZBED3Q96IU2 234 aaPredicted RBP26.96■■□□□ 1.91
PNKP-212ENST00000599454 CD209Q9NNX6 404 aa26.96■■□□□ 1.91
PNKP-212ENST00000599454 VAMP4O75379 141 aa26.95■■□□□ 1.9
PNKP-212ENST00000599454 PKN2Q16513 984 aaKnown RBP26.95■■□□□ 1.9
PNKP-212ENST00000599454 NOM1Q5C9Z4 860 aaKnown RBP26.95■■□□□ 1.9
PNKP-212ENST00000599454 IFIT5Q13325 482 aaKnown RBP26.94■■□□□ 1.9
PNKP-212ENST00000599454 SREBF2Q12772 1141 aa26.93■■□□□ 1.9
PNKP-212ENST00000599454 LAMB1P07942 1786 aa26.93■■□□□ 1.9
PNKP-212ENST00000599454 IRS2Q9Y4H2 1338 aa26.92■■□□□ 1.9
PNKP-212ENST00000599454 MTMR14Q8NCE2 650 aa26.92■■□□□ 1.9
PNKP-212ENST00000599454 DLGAP5Q15398 846 aa26.91■■□□□ 1.9
PNKP-212ENST00000599454 MRS2Q9HD23 443 aa26.91■■□□□ 1.9
PNKP-212ENST00000599454 TBC1D8O95759 1140 aa26.9■■□□□ 1.9
PNKP-212ENST00000599454 FKBP1AP62942 108 aaKnown RBP26.9■■□□□ 1.9
PNKP-212ENST00000599454 FOXO4P98177 505 aa26.9■■□□□ 1.9
PNKP-212ENST00000599454 PTPN12Q05209 780 aaKnown RBP26.9■■□□□ 1.9
PNKP-212ENST00000599454 LDLRAD1Q5T700 205 aa26.9■■□□□ 1.9
PNKP-212ENST00000599454 ZNF804AQ7Z570 1209 aa26.9■■□□□ 1.9
PNKP-212ENST00000599454 ZNF296Q8WUU4 475 aaPredicted RBP26.9■■□□□ 1.9
PNKP-212ENST00000599454 CFHR5Q9BXR6 569 aa26.9■■□□□ 1.9
PNKP-212ENST00000599454 PPP2R3BQ9Y5P8 575 aa26.9■■□□□ 1.9
PNKP-212ENST00000599454 IL1R1P14778 569 aa26.89■■□□□ 1.9
PNKP-212ENST00000599454 SOX10P56693 466 aa26.89■■□□□ 1.9
PNKP-212ENST00000599454 EXOSC9Q06265 439 aaKnown RBP26.89■■□□□ 1.9
PNKP-212ENST00000599454 BEND3Q5T5X7 828 aa26.89■■□□□ 1.9
PNKP-212ENST00000599454 CHMP3Q9Y3E7 222 aa26.89■■□□□ 1.9
PNKP-212ENST00000599454 TAF5LO75529 589 aa26.88■■□□□ 1.89
PNKP-212ENST00000599454 DEFB129Q9H1M3 183 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms