RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 GJA3Q9Y6H8 435 aa22.07■■□□□ 1.12
USHBP1-209ENST00000598570 SNAP23O00161 211 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 EYA2O00167 538 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 ZBTB22O15209 634 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 GNAI2P04899 355 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 MS4A1P11836 297 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 KLRK1P26718 216 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 EPS15P42566 896 aa22.06■■□□□ 1.12
USHBP1-209ENST00000598570 C16orf71Q8IYS4 520 aaPredicted RBP22.06■■□□□ 1.12
USHBP1-209ENST00000598570 PDE8BO95263 885 aa22.05■■□□□ 1.12
USHBP1-209ENST00000598570 IL1R1P14778 569 aa22.05■■□□□ 1.12
USHBP1-209ENST00000598570 FGFR2P21802 821 aa22.05■■□□□ 1.12
USHBP1-209ENST00000598570 USP50Q70EL3 339 aaPredicted RBP22.05■■□□□ 1.12
USHBP1-209ENST00000598570 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
USHBP1-209ENST00000598570 KLHDC4Q8TBB5 520 aa22.05■■□□□ 1.12
USHBP1-209ENST00000598570 STRIP1Q5VSL9 837 aa22.04■■□□□ 1.12
USHBP1-209ENST00000598570 AGBL3Q8NEM8 1001 aa22.04■■□□□ 1.12
USHBP1-209ENST00000598570 USP17L3A6NCW0 530 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 USP17L4A6NCW7 530 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 POTEIP0CG38 1075 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 POTEJP0CG39 1038 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 MMP14P50281 582 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 ZNF280AP59817 542 aaPredicted RBP22.03■■□□□ 1.12
USHBP1-209ENST00000598570 DACT2Q5SW24 774 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 CHADLQ6NUI6 762 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 USP17L1Q7RTZ2 530 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 CD209Q9NNX6 404 aa22.03■■□□□ 1.12
USHBP1-209ENST00000598570 ADARB2Q9NS39 739 aaKnown RBP22.03■■□□□ 1.12
USHBP1-209ENST00000598570 CNOT7Q9UIV1 285 aaKnown RBP22.03■■□□□ 1.12
USHBP1-209ENST00000598570 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
USHBP1-209ENST00000598570 HSPA6P17066 643 aa22.02■■□□□ 1.12
USHBP1-209ENST00000598570 LMOD1P29536 600 aaPredicted RBP22.02■■□□□ 1.12
USHBP1-209ENST00000598570 POLA2Q14181 598 aa22.02■■□□□ 1.12
USHBP1-209ENST00000598570 PDE3AQ14432 1141 aa22.02■■□□□ 1.12
USHBP1-209ENST00000598570 RSBN1LQ6PCB5 846 aaPredicted RBP22.02■■□□□ 1.12
USHBP1-209ENST00000598570 FBXO33Q7Z6M2 555 aa22.02■■□□□ 1.12
USHBP1-209ENST00000598570 FTSJ3Q8IY81 847 aaKnown RBP22.02■■□□□ 1.12
USHBP1-209ENST00000598570 FAM84BQ96KN1 310 aaPredicted RBP22.02■■□□□ 1.12
USHBP1-209ENST00000598570 PANK1Q8TE04 598 aa22.01■■□□□ 1.11
USHBP1-209ENST00000598570 ZC3H15Q8WU90 426 aaKnown RBP22.01■■□□□ 1.11
USHBP1-209ENST00000598570 ZBTB12Q9Y330 459 aaPredicted RBP22.01■■□□□ 1.11
USHBP1-209ENST00000598570 KCNJ4P48050 445 aa22■■□□□ 1.11
USHBP1-209ENST00000598570 HIRAP54198 1017 aaPredicted RBP22■■□□□ 1.11
USHBP1-209ENST00000598570 FKBP1AP62942 108 aaKnown RBP22■■□□□ 1.11
USHBP1-209ENST00000598570 ATP8B2P98198 1209 aa22■■□□□ 1.11
USHBP1-209ENST00000598570 TDRD7Q8NHU6 1098 aaKnown RBP22■■□□□ 1.11
USHBP1-209ENST00000598570 SSH3Q8TE77 659 aa22■■□□□ 1.11
USHBP1-209ENST00000598570 CEP350Q5VT06 3117 aa22■■□□□ 1.11
USHBP1-209ENST00000598570 G3V3G9 751 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 SRGAP3O43295 1099 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 SASH1O94885 1247 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 IL15P40933 162 aaPredicted RBP21.99■■□□□ 1.11
USHBP1-209ENST00000598570 METTL24Q5JXM2 366 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 DCAF8Q5TAQ9 597 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 FAM205AQ6ZU69 1335 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 PASKQ96RG2 1323 aa21.99■■□□□ 1.11
USHBP1-209ENST00000598570 PNMA6EA0A0J9YXQ4 647 aa21.98■■□□□ 1.11
USHBP1-209ENST00000598570 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
USHBP1-209ENST00000598570 ZNF804AQ7Z570 1209 aa21.98■■□□□ 1.11
USHBP1-209ENST00000598570 SHTN1A0MZ66 631 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 H7C1D1 291 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 PLIN1O60240 522 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 PUM3Q15397 648 aaKnown RBP21.97■■□□□ 1.11
USHBP1-209ENST00000598570 TTLL5Q6EMB2 1281 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 ITPRIPQ8IWB1 547 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 MICALL2Q8IY33 904 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 ZBTB40Q9NUA8 1239 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 MYO3BQ8WXR4 1341 aa21.97■■□□□ 1.11
USHBP1-209ENST00000598570 HIBADHP31937 336 aaKnown RBP21.96■■□□□ 1.11
USHBP1-209ENST00000598570 LPIN2Q92539 896 aa21.96■■□□□ 1.11
USHBP1-209ENST00000598570 PA2G4Q9UQ80 394 aaKnown RBP21.96■■□□□ 1.11
USHBP1-209ENST00000598570 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
USHBP1-209ENST00000598570 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
USHBP1-209ENST00000598570 APLP1P51693 650 aa21.94■■□□□ 1.1
USHBP1-209ENST00000598570 TRPM4Q8TD43 1214 aa21.94■■□□□ 1.1
USHBP1-209ENST00000598570 CEP126Q9P2H0 1117 aa21.94■■□□□ 1.1
USHBP1-209ENST00000598570 DDX19BQ9UMR2 479 aa21.94■■□□□ 1.1
USHBP1-209ENST00000598570 EGFRP00533 1210 aa21.93■■□□□ 1.1
USHBP1-209ENST00000598570 GYG1P46976 350 aa21.93■■□□□ 1.1
USHBP1-209ENST00000598570 EAPPQ56P03 285 aaPredicted RBP21.93■■□□□ 1.1
USHBP1-209ENST00000598570 CNTROBQ8N137 903 aa21.93■■□□□ 1.1
USHBP1-209ENST00000598570 CERS5Q8N5B7 392 aa21.93■■□□□ 1.1
USHBP1-209ENST00000598570 ZBED3Q96IU2 234 aaPredicted RBP21.93■■□□□ 1.1
USHBP1-209ENST00000598570 GTF2IP78347 998 aa21.92■■□□□ 1.1
USHBP1-209ENST00000598570 C20orf194Q5TEA3 1177 aa21.92■■□□□ 1.1
USHBP1-209ENST00000598570 CEP85Q6P2H3 762 aa21.92■■□□□ 1.1
USHBP1-209ENST00000598570 SAMD7Q7Z3H4 446 aa21.92■■□□□ 1.1
USHBP1-209ENST00000598570 DNAJC5GQ8N7S2 189 aa21.92■■□□□ 1.1
USHBP1-209ENST00000598570 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.92■■□□□ 1.1
USHBP1-209ENST00000598570 IFIT1P09914 478 aaKnown RBP21.91■■□□□ 1.1
USHBP1-209ENST00000598570 MTMR14Q8NCE2 650 aa21.91■■□□□ 1.1
USHBP1-209ENST00000598570 MXD3Q9BW11 206 aa21.91■■□□□ 1.1
USHBP1-209ENST00000598570 SIL1Q9H173 461 aa21.91■■□□□ 1.1
USHBP1-209ENST00000598570 CHMP4BQ9H444 224 aaKnown RBP21.91■■□□□ 1.1
USHBP1-209ENST00000598570 CAVIN4Q5BKX8 364 aa21.9■■□□□ 1.1
USHBP1-209ENST00000598570 MAP1SQ66K74 1059 aaPredicted RBP21.9■■□□□ 1.1
USHBP1-209ENST00000598570 COG6Q9Y2V7 657 aa21.9■■□□□ 1.1
USHBP1-209ENST00000598570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.9■■□□□ 1.1
USHBP1-209ENST00000598570 POLR2AP24928 1970 aaKnown RBP21.9■■□□□ 1.1
USHBP1-209ENST00000598570 ARAP2Q8WZ64 1704 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms