RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DZIP1LQ8IYY4 767 aaKnown RBP20.93■□□□□ 0.94
SSBP4-204ENST00000597724 KLHDC4Q8TBB5 520 aa20.93■□□□□ 0.94
SSBP4-204ENST00000597724 ADARB2Q9NS39 739 aaKnown RBP20.93■□□□□ 0.94
SSBP4-204ENST00000597724 MROH5Q6ZUA9 1318 aa20.93■□□□□ 0.94
SSBP4-204ENST00000597724 ADAMTSL1Q8N6G6 1762 aa20.92■□□□□ 0.94
SSBP4-204ENST00000597724 PTPN12Q05209 780 aaKnown RBP20.92■□□□□ 0.94
SSBP4-204ENST00000597724 CNOT7Q9UIV1 285 aaKnown RBP20.92■□□□□ 0.94
SSBP4-204ENST00000597724 CLEC11AQ9Y240 323 aa20.92■□□□□ 0.94
SSBP4-204ENST00000597724 USP17L3A6NCW0 530 aa20.91■□□□□ 0.94
SSBP4-204ENST00000597724 USP17L4A6NCW7 530 aa20.91■□□□□ 0.94
SSBP4-204ENST00000597724 RLBP1P12271 317 aa20.91■□□□□ 0.94
SSBP4-204ENST00000597724 UBE4AQ14139 1066 aa20.91■□□□□ 0.94
SSBP4-204ENST00000597724 PSME4Q14997 1843 aa20.91■□□□□ 0.94
SSBP4-204ENST00000597724 USP17L1Q7RTZ2 530 aa20.91■□□□□ 0.94
SSBP4-204ENST00000597724 FTSJ3Q8IY81 847 aaKnown RBP20.91■□□□□ 0.94
SSBP4-204ENST00000597724 RSBN1LQ6PCB5 846 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-204ENST00000597724 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
SSBP4-204ENST00000597724 SHTN1A0MZ66 631 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 H7C1D1 291 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 EYA2O00167 538 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 GNAI2P04899 355 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 APLP1P51693 650 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 MTX1Q13505 466 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 METTL24Q5JXM2 366 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 MICALL2Q8IY33 904 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 AGBL3Q8NEM8 1001 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 CD209Q9NNX6 404 aa20.89■□□□□ 0.93
SSBP4-204ENST00000597724 ZNF609O15014 1411 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 PDE8BO95263 885 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 STRIP1Q5VSL9 837 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 ZNF804AQ7Z570 1209 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 VGLL2Q8N8G2 317 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 GMLQ99445 158 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 FBXO3Q9UK99 471 aa20.88■□□□□ 0.93
SSBP4-204ENST00000597724 ITGBL1O95965 494 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-204ENST00000597724 HIRAP54198 1017 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-204ENST00000597724 DACT2Q5SW24 774 aa20.87■□□□□ 0.93
SSBP4-204ENST00000597724 MAP1SQ66K74 1059 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-204ENST00000597724 ATG9AQ7Z3C6 839 aa20.87■□□□□ 0.93
SSBP4-204ENST00000597724 ZBTB7BO15156 539 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-204ENST00000597724 IL1R1P14778 569 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 TTLL5Q6EMB2 1281 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 ITPRIPQ8IWB1 547 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 CNTROBQ8N137 903 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 TRPM4Q8TD43 1214 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 SIL1Q9H173 461 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 COPRSQ9NQ92 184 aa20.86■□□□□ 0.93
SSBP4-204ENST00000597724 ZNF646O15015 1829 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-204ENST00000597724 SRGAP3O43295 1099 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 CIAO1O76071 339 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 MS4A1P11836 297 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 GTF2IP78347 998 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 SAMD7Q7Z3H4 446 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 PANK1Q8TE04 598 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 FAM84BQ96KN1 310 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-204ENST00000597724 PGAP2Q9UHJ9 254 aa20.85■□□□□ 0.93
SSBP4-204ENST00000597724 PA2G4Q9UQ80 394 aaKnown RBP20.85■□□□□ 0.93
SSBP4-204ENST00000597724 PASKQ96RG2 1323 aa20.84■□□□□ 0.93
SSBP4-204ENST00000597724 ZC3H15Q8WU90 426 aaKnown RBP20.84■□□□□ 0.93
SSBP4-204ENST00000597724 FBXW7Q969H0 707 aa20.84■□□□□ 0.93
SSBP4-204ENST00000597724 MXD3Q9BW11 206 aa20.84■□□□□ 0.93
SSBP4-204ENST00000597724 EGFRP00533 1210 aa20.83■□□□□ 0.93
SSBP4-204ENST00000597724 USP17L8P0C7I0 530 aa20.83■□□□□ 0.93
SSBP4-204ENST00000597724 FGFR2P21802 821 aa20.83■□□□□ 0.93
SSBP4-204ENST00000597724 HIBADHP31937 336 aaKnown RBP20.83■□□□□ 0.93
SSBP4-204ENST00000597724 GYG1P46976 350 aa20.83■□□□□ 0.93
SSBP4-204ENST00000597724 ZNF280AP59817 542 aaPredicted RBP20.83■□□□□ 0.93
SSBP4-204ENST00000597724 TBC1D10BQ4KMP7 808 aaPredicted RBP20.83■□□□□ 0.93
SSBP4-204ENST00000597724 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
SSBP4-204ENST00000597724 IL15P40933 162 aaPredicted RBP20.82■□□□□ 0.92
SSBP4-204ENST00000597724 PUM3Q15397 648 aaKnown RBP20.82■□□□□ 0.92
SSBP4-204ENST00000597724 RBM26Q5T8P6 1007 aaKnown RBP20.82■□□□□ 0.92
SSBP4-204ENST00000597724 FBXO33Q7Z6M2 555 aa20.82■□□□□ 0.92
SSBP4-204ENST00000597724 TDRD7Q8NHU6 1098 aaKnown RBP20.82■□□□□ 0.92
SSBP4-204ENST00000597724 YTHDC1Q96MU7 727 aaKnown RBP20.82■□□□□ 0.92
SSBP4-204ENST00000597724 PNMA6EA0A0J9YXQ4 647 aa20.81■□□□□ 0.92
SSBP4-204ENST00000597724 SASH1O94885 1247 aa20.81■□□□□ 0.92
SSBP4-204ENST00000597724 HTRA3P83110 453 aa20.81■□□□□ 0.92
SSBP4-204ENST00000597724 CEP126Q9P2H0 1117 aa20.81■□□□□ 0.92
SSBP4-204ENST00000597724 KIF4BQ2VIQ3 1234 aa20.8■□□□□ 0.92
SSBP4-204ENST00000597724 CAVIN4Q5BKX8 364 aa20.8■□□□□ 0.92
SSBP4-204ENST00000597724 LPIN2Q92539 896 aa20.8■□□□□ 0.92
SSBP4-204ENST00000597724 IFIT1P09914 478 aaKnown RBP20.79■□□□□ 0.92
SSBP4-204ENST00000597724 MMP14P50281 582 aa20.79■□□□□ 0.92
SSBP4-204ENST00000597724 OGFOD1Q8N543 542 aa20.79■□□□□ 0.92
SSBP4-204ENST00000597724 CERS5Q8N5B7 392 aa20.79■□□□□ 0.92
SSBP4-204ENST00000597724 DNAJC5GQ8N7S2 189 aa20.79■□□□□ 0.92
SSBP4-204ENST00000597724 C1orf115Q9H7X2 142 aa20.79■□□□□ 0.92
SSBP4-204ENST00000597724 MYOZ2Q9NPC6 264 aa20.79■□□□□ 0.92
SSBP4-204ENST00000597724 FAM205AQ6ZU69 1335 aa20.78■□□□□ 0.92
SSBP4-204ENST00000597724 FKBP1AP62942 108 aaKnown RBP20.78■□□□□ 0.92
SSBP4-204ENST00000597724 ATP8B2P98198 1209 aa20.78■□□□□ 0.92
SSBP4-204ENST00000597724 VPS37DQ86XT2 251 aa20.78■□□□□ 0.92
SSBP4-204ENST00000597724 SLC5A1P13866 664 aa20.77■□□□□ 0.92
SSBP4-204ENST00000597724 BCAMP50895 628 aa20.77■□□□□ 0.92
SSBP4-204ENST00000597724 POLA2Q14181 598 aa20.77■□□□□ 0.92
SSBP4-204ENST00000597724 MVPQ14764 893 aaKnown RBP20.77■□□□□ 0.92
SSBP4-204ENST00000597724 ATP2B3Q16720 1220 aa20.77■□□□□ 0.92
SSBP4-204ENST00000597724 KIAA0825Q8IV33 1275 aa20.77■□□□□ 0.92
SSBP4-204ENST00000597724 SSH3Q8TE77 659 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms