RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 GREM2Q9H772 168 aa21.22■□□□□ 0.99
SHKBP1-215ENST00000597649 BSDC1Q9NW68 430 aaPredicted RBP21.22■□□□□ 0.99
SHKBP1-215ENST00000597649 HPS5Q9UPZ3 1129 aa21.22■□□□□ 0.99
SHKBP1-215ENST00000597649 TXNRD3Q86VQ6 643 aa21.21■□□□□ 0.99
SHKBP1-215ENST00000597649 ZNF296Q8WUU4 475 aaPredicted RBP21.21■□□□□ 0.99
SHKBP1-215ENST00000597649 PI4KAP2A4QPH2 592 aa21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 WNT10BO00744 389 aa21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 TM4SF4P48230 202 aa21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 PI4KAP1Q8N8J0 262 aa21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 PAPPA2Q9BXP8 1791 aa21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 PSME4Q14997 1843 aa21.2■□□□□ 0.98
SHKBP1-215ENST00000597649 ANP32CO43423 234 aa21.19■□□□□ 0.98
SHKBP1-215ENST00000597649 DDX58O95786 925 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-215ENST00000597649 CCT4P50991 539 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-215ENST00000597649 CCDC30Q5VVM6 783 aa21.19■□□□□ 0.98
SHKBP1-215ENST00000597649 KSR2Q6VAB6 950 aa21.19■□□□□ 0.98
SHKBP1-215ENST00000597649 MED23Q9ULK4 1368 aa21.19■□□□□ 0.98
SHKBP1-215ENST00000597649 MKRN3Q13064 507 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-215ENST00000597649 CWF19L2Q2TBE0 894 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-215ENST00000597649 STRIP1Q5VSL9 837 aa21.18■□□□□ 0.98
SHKBP1-215ENST00000597649 R3HDMLQ9H3Y0 253 aa21.18■□□□□ 0.98
SHKBP1-215ENST00000597649 KLRK1P26718 216 aa21.17■□□□□ 0.98
SHKBP1-215ENST00000597649 FBXW7Q969H0 707 aa21.17■□□□□ 0.98
SHKBP1-215ENST00000597649 COA1Q9GZY4 146 aa21.17■□□□□ 0.98
SHKBP1-215ENST00000597649 PCDH10Q9P2E7 1040 aa21.17■□□□□ 0.98
SHKBP1-215ENST00000597649 HTTP42858 3142 aa21.17■□□□□ 0.98
SHKBP1-215ENST00000597649 GPR25O00155 361 aa21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 SASH1O94885 1247 aa21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 PTPN12Q05209 780 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 TTLL12Q14166 644 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 PKN2Q16513 984 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 OGFOD1Q8N543 542 aa21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 HDAC9Q9UKV0 1011 aa21.16■□□□□ 0.98
SHKBP1-215ENST00000597649 MKI67P46013 3256 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-215ENST00000597649 NEURL1BA8MQ27 555 aa21.15■□□□□ 0.98
SHKBP1-215ENST00000597649 H7C1W4 665 aa21.15■□□□□ 0.98
SHKBP1-215ENST00000597649 PRKG1Q13976 671 aa21.15■□□□□ 0.98
SHKBP1-215ENST00000597649 G2E3Q7L622 706 aa21.15■□□□□ 0.98
SHKBP1-215ENST00000597649 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-215ENST00000597649 TTLL5Q6EMB2 1281 aa21.14■□□□□ 0.97
SHKBP1-215ENST00000597649 TSR2Q969E8 191 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-215ENST00000597649 ZBED3Q96IU2 234 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-215ENST00000597649 LEMD3Q9Y2U8 911 aa21.14■□□□□ 0.97
SHKBP1-215ENST00000597649 KIAA0825Q8IV33 1275 aa21.13■□□□□ 0.97
SHKBP1-215ENST00000597649 FZD1Q9UP38 647 aa21.13■□□□□ 0.97
SHKBP1-215ENST00000597649 ZNF804BA4D1E1 1349 aa21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 MYO3BQ8WXR4 1341 aa21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 NOM1Q5C9Z4 860 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 LDLRAD1Q5T700 205 aa21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 PRPF38BQ5VTL8 546 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 UBE3BQ7Z3V4 1068 aa21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 ZNF646O15015 1829 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 CENPFP49454 3210 aa21.12■□□□□ 0.97
SHKBP1-215ENST00000597649 SNAP23O00161 211 aa21.11■□□□□ 0.97
SHKBP1-215ENST00000597649 NF2P35240 595 aa21.11■□□□□ 0.97
SHKBP1-215ENST00000597649 GTF2IP78347 998 aa21.11■□□□□ 0.97
SHKBP1-215ENST00000597649 CHMP4AQ9BY43 222 aa21.11■□□□□ 0.97
SHKBP1-215ENST00000597649 CSF1RP07333 972 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 ITGA6P23229 1130 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 CASP7P55210 303 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 NEXNQ0ZGT2 675 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 SPRYD7Q5W111 196 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 ARMC9Q7Z3E5 817 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 PLA2G12BQ9BX93 195 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 CFHR5Q9BXR6 569 aa21.1■□□□□ 0.97
SHKBP1-215ENST00000597649 MMP14P50281 582 aa21.09■□□□□ 0.97
SHKBP1-215ENST00000597649 GCKRQ14397 625 aa21.09■□□□□ 0.97
SHKBP1-215ENST00000597649 FBXO46Q6PJ61 603 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-215ENST00000597649 ANGEL1Q9UNK9 670 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-215ENST00000597649 PCDHAC2Q9Y5I4 1007 aa21.09■□□□□ 0.97
SHKBP1-215ENST00000597649 IRS2Q9Y4H2 1338 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 FKTNO75072 461 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 SLC4A2P04920 1241 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 SREBF2Q12772 1141 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 APOBEC3FQ8IUX4 373 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 CERS5Q8N5B7 392 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 ANKRD2Q9GZV1 360 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 CD209Q9NNX6 404 aa21.08■□□□□ 0.97
SHKBP1-215ENST00000597649 SPEF2Q9C093 1822 aa21.07■□□□□ 0.96
SHKBP1-215ENST00000597649 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
SHKBP1-215ENST00000597649 DEFB129Q9H1M3 183 aa21.07■□□□□ 0.96
SHKBP1-215ENST00000597649 CHRNDQ07001 517 aa21.06■□□□□ 0.96
SHKBP1-215ENST00000597649 MPHOSPH8Q99549 860 aa21.06■□□□□ 0.96
SHKBP1-215ENST00000597649 BRCA2P51587 3418 aa21.05■□□□□ 0.96
SHKBP1-215ENST00000597649 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-215ENST00000597649 HELBQ8NG08 1087 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-215ENST00000597649 CLMNQ96JQ2 1002 aa21.05■□□□□ 0.96
SHKBP1-215ENST00000597649 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-215ENST00000597649 AOX1Q06278 1338 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 MYH3P11055 1940 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 TAF5LO75529 589 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 DLGAP5Q15398 846 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 MAP3K11Q16584 847 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 MTMR14Q8NCE2 650 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 SLC10A4Q96EP9 437 aa21.04■□□□□ 0.96
SHKBP1-215ENST00000597649 FLIIQ13045 1269 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms