RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NEURL1BA8MQ27 555 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 ATP5J2-PTCD1G3V325 749 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 RAD17O75943 681 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 EGFRP00533 1210 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 GNAI3P08754 354 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 HLFQ16534 295 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 RTFDC1Q9BY42 306 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 CWC25Q9NXE8 425 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 C9orf78Q9NZ63 289 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
SHKBP1-213ENST00000597325 H7C1D1 291 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 IGKV5-2P06315 115 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 TNIP1Q15025 636 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 SAMD7Q7Z3H4 446 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 CRAMP1Q96RY5 1269 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 HDAC5Q9UQL6 1122 aa15.08■□□□□ 0
SHKBP1-213ENST00000597325 YDJCA8MPS7 323 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 GRM8O00222 908 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 UBTFL1P0CB47 393 aaPredicted RBP15.07■□□□□ 0
SHKBP1-213ENST00000597325 GPTP24298 496 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 GCKRQ14397 625 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
SHKBP1-213ENST00000597325 MEIS3Q99687 375 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 ISCA1Q9BUE6 129 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 CFHR5Q9BXR6 569 aa15.07■□□□□ 0
SHKBP1-213ENST00000597325 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
SHKBP1-213ENST00000597325 EN2P19622 333 aaPredicted RBP15.06■□□□□ 0
SHKBP1-213ENST00000597325 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
SHKBP1-213ENST00000597325 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
SHKBP1-213ENST00000597325 TRIM28Q13263 835 aaKnown RBP15.06■□□□□ 0
SHKBP1-213ENST00000597325 PARP10Q53GL7 1025 aa15.06■□□□□ 0
SHKBP1-213ENST00000597325 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
SHKBP1-213ENST00000597325 ZNF34Q8IZ26 560 aa15.06■□□□□ 0
SHKBP1-213ENST00000597325 DPF2Q92785 391 aa15.06■□□□□ 0
SHKBP1-213ENST00000597325 FKTNO75072 461 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
SHKBP1-213ENST00000597325 TM4SF4P48230 202 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 NLRP10Q86W26 655 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 USP44Q9H0E7 712 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 R3HDMLQ9H3Y0 253 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 ZBTB40Q9NUA8 1239 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 ATP6V0A2Q9Y487 856 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 PITPNM2Q9BZ72 1349 aa15.05■□□□□ -0
SHKBP1-213ENST00000597325 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
SHKBP1-213ENST00000597325 GNAI2P04899 355 aa15.04■□□□□ -0
SHKBP1-213ENST00000597325 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
SHKBP1-213ENST00000597325 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
SHKBP1-213ENST00000597325 PPP1R42Q7Z4L9 355 aa15.04■□□□□ -0
SHKBP1-213ENST00000597325 DCPSQ96C86 337 aaKnown RBP15.04■□□□□ -0
SHKBP1-213ENST00000597325 NYXQ9GZU5 481 aa15.04■□□□□ -0
SHKBP1-213ENST00000597325 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
SHKBP1-213ENST00000597325 UTYO14607 1347 aa15.03■□□□□ -0
SHKBP1-213ENST00000597325 ZBTB38Q8NAP3 1195 aaPredicted RBP15.03■□□□□ -0
SHKBP1-213ENST00000597325 SUPT20HQ8NEM7 779 aa15.03■□□□□ -0
SHKBP1-213ENST00000597325 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
SHKBP1-213ENST00000597325 UTP14AQ9BVJ6 771 aaKnown RBP15.03■□□□□ -0
SHKBP1-213ENST00000597325 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
SHKBP1-213ENST00000597325 PPP4R2Q9NY27 417 aa15.03■□□□□ -0
SHKBP1-213ENST00000597325 TRMT112Q9UI30 125 aaKnown RBP15.03■□□□□ -0
SHKBP1-213ENST00000597325 H0YGN5 161 aa15.02■□□□□ -0
SHKBP1-213ENST00000597325 PCCAP05165 728 aaPredicted RBP15.02■□□□□ -0
SHKBP1-213ENST00000597325 NBPF7P0C2Y1 421 aaPredicted RBP15.02■□□□□ -0
SHKBP1-213ENST00000597325 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
SHKBP1-213ENST00000597325 CDCA5Q96FF9 252 aa15.02■□□□□ -0
SHKBP1-213ENST00000597325 LRRFIP2Q9Y608 721 aaKnown RBP15.02■□□□□ -0
SHKBP1-213ENST00000597325 EYSQ5T1H1 3165 aa15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 HSP90B1P14625 803 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 FKBP1BP68106 108 aa15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 OTOP1Q7RTM1 612 aa15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 ARMC5Q96C12 935 aa15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 LAMB2P55268 1798 aa15.01□□□□□ -0.01
SHKBP1-213ENST00000597325 SH3TC1Q8TE82 1336 aa15□□□□□ -0.01
SHKBP1-213ENST00000597325 H7C1W4 665 aa15□□□□□ -0.01
SHKBP1-213ENST00000597325 PSMD14O00487 310 aa15□□□□□ -0.01
SHKBP1-213ENST00000597325 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
SHKBP1-213ENST00000597325 SUSD4Q5VX71 490 aa15□□□□□ -0.01
SHKBP1-213ENST00000597325 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
SHKBP1-213ENST00000597325 DUOX1Q9NRD9 1551 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 NTSR2O95665 410 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 DPP8Q6V1X1 898 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 JARID2Q92833 1246 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 FAM89AQ96GI7 184 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 SUCLG2Q96I99 432 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 GGA3Q9NZ52 723 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 TRIM17Q9Y577 477 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 MUC3AQ02505 3323 aa14.99□□□□□ -0.01
SHKBP1-213ENST00000597325 ASTN2O75129 1339 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-213ENST00000597325 HMMRO75330 724 aa14.98□□□□□ -0.01
SHKBP1-213ENST00000597325 RPAP2Q8IXW5 612 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-213ENST00000597325 PRO3102Q9H379 93 aa14.98□□□□□ -0.01
SHKBP1-213ENST00000597325 IRS4O14654 1257 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-213ENST00000597325 RPS12P25398 132 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-213ENST00000597325 CASP7P55210 303 aa14.97□□□□□ -0.01
SHKBP1-213ENST00000597325 RBM26Q5T8P6 1007 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms