RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 CNOT7Q9UIV1 285 aaKnown RBP20.51■□□□□ 0.87
CHERP-206ENST00000597261 ZBTB12Q9Y330 459 aaPredicted RBP20.51■□□□□ 0.87
CHERP-206ENST00000597261 EYA2O00167 538 aa20.5■□□□□ 0.87
CHERP-206ENST00000597261 ZBTB7BO15156 539 aaPredicted RBP20.5■□□□□ 0.87
CHERP-206ENST00000597261 GNAI2P04899 355 aa20.5■□□□□ 0.87
CHERP-206ENST00000597261 MTX1Q13505 466 aa20.5■□□□□ 0.87
CHERP-206ENST00000597261 ADARB2Q9NS39 739 aaKnown RBP20.5■□□□□ 0.87
CHERP-206ENST00000597261 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
CHERP-206ENST00000597261 USP17L3A6NCW0 530 aa20.49■□□□□ 0.87
CHERP-206ENST00000597261 USP17L4A6NCW7 530 aa20.49■□□□□ 0.87
CHERP-206ENST00000597261 USP17L1Q7RTZ2 530 aa20.49■□□□□ 0.87
CHERP-206ENST00000597261 FTSJ3Q8IY81 847 aaKnown RBP20.49■□□□□ 0.87
CHERP-206ENST00000597261 VGLL2Q8N8G2 317 aa20.49■□□□□ 0.87
CHERP-206ENST00000597261 GMLQ99445 158 aa20.49■□□□□ 0.87
CHERP-206ENST00000597261 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
CHERP-206ENST00000597261 PDE8BO95263 885 aa20.48■□□□□ 0.87
CHERP-206ENST00000597261 EAPPQ56P03 285 aaPredicted RBP20.48■□□□□ 0.87
CHERP-206ENST00000597261 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
CHERP-206ENST00000597261 ATG9AQ7Z3C6 839 aa20.48■□□□□ 0.87
CHERP-206ENST00000597261 AGBL3Q8NEM8 1001 aa20.48■□□□□ 0.87
CHERP-206ENST00000597261 COPRSQ9NQ92 184 aa20.48■□□□□ 0.87
CHERP-206ENST00000597261 H7C1D1 291 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 CIAO1O76071 339 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 MS4A1P11836 297 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 IL1R1P14778 569 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 METTL24Q5JXM2 366 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 STRIP1Q5VSL9 837 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 PGAP2Q9UHJ9 254 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 SCN4AP35499 1836 aa20.47■□□□□ 0.87
CHERP-206ENST00000597261 SHTN1A0MZ66 631 aa20.46■□□□□ 0.87
CHERP-206ENST00000597261 ITGBL1O95965 494 aaPredicted RBP20.46■□□□□ 0.87
CHERP-206ENST00000597261 HIRAP54198 1017 aaPredicted RBP20.46■□□□□ 0.87
CHERP-206ENST00000597261 DACT2Q5SW24 774 aa20.46■□□□□ 0.87
CHERP-206ENST00000597261 MICALL2Q8IY33 904 aa20.46■□□□□ 0.87
CHERP-206ENST00000597261 PANK1Q8TE04 598 aa20.46■□□□□ 0.87
CHERP-206ENST00000597261 FAM84BQ96KN1 310 aaPredicted RBP20.46■□□□□ 0.87
CHERP-206ENST00000597261 CLEC11AQ9Y240 323 aa20.46■□□□□ 0.87
CHERP-206ENST00000597261 TTLL5Q6EMB2 1281 aa20.45■□□□□ 0.86
CHERP-206ENST00000597261 FBXO33Q7Z6M2 555 aa20.45■□□□□ 0.86
CHERP-206ENST00000597261 SRGAP3O43295 1099 aa20.44■□□□□ 0.86
CHERP-206ENST00000597261 FGFR2P21802 821 aa20.44■□□□□ 0.86
CHERP-206ENST00000597261 APLP1P51693 650 aa20.44■□□□□ 0.86
CHERP-206ENST00000597261 ZNF280AP59817 542 aaPredicted RBP20.44■□□□□ 0.86
CHERP-206ENST00000597261 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
CHERP-206ENST00000597261 CNTROBQ8N137 903 aa20.44■□□□□ 0.86
CHERP-206ENST00000597261 ZC3H15Q8WU90 426 aaKnown RBP20.44■□□□□ 0.86
CHERP-206ENST00000597261 PA2G4Q9UQ80 394 aaKnown RBP20.44■□□□□ 0.86
CHERP-206ENST00000597261 ZNF609O15014 1411 aa20.44■□□□□ 0.86
CHERP-206ENST00000597261 SASH1O94885 1247 aa20.43■□□□□ 0.86
CHERP-206ENST00000597261 HIBADHP31937 336 aaKnown RBP20.43■□□□□ 0.86
CHERP-206ENST00000597261 IL15P40933 162 aaPredicted RBP20.43■□□□□ 0.86
CHERP-206ENST00000597261 ATP8B2P98198 1209 aa20.43■□□□□ 0.86
CHERP-206ENST00000597261 ZNF804AQ7Z570 1209 aa20.43■□□□□ 0.86
CHERP-206ENST00000597261 TDRD7Q8NHU6 1098 aaKnown RBP20.43■□□□□ 0.86
CHERP-206ENST00000597261 MMP14P50281 582 aa20.42■□□□□ 0.86
CHERP-206ENST00000597261 GTF2IP78347 998 aa20.42■□□□□ 0.86
CHERP-206ENST00000597261 MAP1SQ66K74 1059 aaPredicted RBP20.42■□□□□ 0.86
CHERP-206ENST00000597261 SAMD7Q7Z3H4 446 aa20.42■□□□□ 0.86
CHERP-206ENST00000597261 TRPM4Q8TD43 1214 aa20.42■□□□□ 0.86
CHERP-206ENST00000597261 MXD3Q9BW11 206 aa20.42■□□□□ 0.86
CHERP-206ENST00000597261 CEP126Q9P2H0 1117 aa20.42■□□□□ 0.86
CHERP-206ENST00000597261 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
CHERP-206ENST00000597261 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
CHERP-206ENST00000597261 GYG1P46976 350 aa20.41■□□□□ 0.86
CHERP-206ENST00000597261 PUM3Q15397 648 aaKnown RBP20.41■□□□□ 0.86
CHERP-206ENST00000597261 SIL1Q9H173 461 aa20.41■□□□□ 0.86
CHERP-206ENST00000597261 PASKQ96RG2 1323 aa20.41■□□□□ 0.86
CHERP-206ENST00000597261 SCN9AQ15858 1988 aa20.41■□□□□ 0.86
CHERP-206ENST00000597261 EGFRP00533 1210 aa20.4■□□□□ 0.86
CHERP-206ENST00000597261 FKBP1AP62942 108 aaKnown RBP20.4■□□□□ 0.86
CHERP-206ENST00000597261 POLA2Q14181 598 aa20.4■□□□□ 0.86
CHERP-206ENST00000597261 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
CHERP-206ENST00000597261 LPIN2Q92539 896 aa20.4■□□□□ 0.86
CHERP-206ENST00000597261 SPEF2Q9C093 1822 aa20.39■□□□□ 0.86
CHERP-206ENST00000597261 FAM205AQ6ZU69 1335 aa20.39■□□□□ 0.85
CHERP-206ENST00000597261 MYO3BQ8WXR4 1341 aa20.39■□□□□ 0.85
CHERP-206ENST00000597261 MVPQ14764 893 aaKnown RBP20.39■□□□□ 0.85
CHERP-206ENST00000597261 SSH3Q8TE77 659 aa20.39■□□□□ 0.85
CHERP-206ENST00000597261 IFIT1P09914 478 aaKnown RBP20.38■□□□□ 0.85
CHERP-206ENST00000597261 TBC1D10BQ4KMP7 808 aaPredicted RBP20.38■□□□□ 0.85
CHERP-206ENST00000597261 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
CHERP-206ENST00000597261 RBM26Q5T8P6 1007 aaKnown RBP20.38■□□□□ 0.85
CHERP-206ENST00000597261 DNAJC5GQ8N7S2 189 aa20.38■□□□□ 0.85
CHERP-206ENST00000597261 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
CHERP-206ENST00000597261 BCAMP50895 628 aa20.37■□□□□ 0.85
CHERP-206ENST00000597261 CERS5Q8N5B7 392 aa20.37■□□□□ 0.85
CHERP-206ENST00000597261 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.37■□□□□ 0.85
CHERP-206ENST00000597261 C1orf115Q9H7X2 142 aa20.37■□□□□ 0.85
CHERP-206ENST00000597261 ADAMTSL1Q8N6G6 1762 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 SLC5A1P13866 664 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 OGFOD1Q8N543 542 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 FBXW7Q969H0 707 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 MYOZ2Q9NPC6 264 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 ZBTB40Q9NUA8 1239 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 DDX19BQ9UMR2 479 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 COG6Q9Y2V7 657 aa20.36■□□□□ 0.85
CHERP-206ENST00000597261 KIF4BQ2VIQ3 1234 aa20.35■□□□□ 0.85
CHERP-206ENST00000597261 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
CHERP-206ENST00000597261 VPS37DQ86XT2 251 aa20.35■□□□□ 0.85
CHERP-206ENST00000597261 NOP58Q9Y2X3 529 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms