RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
SHKBP1-207ENST00000595631 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
SHKBP1-207ENST00000595631 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-207ENST00000595631 SCNN1DP51172 638 aa17.17■□□□□ 0.34
SHKBP1-207ENST00000595631 DDX19BQ9UMR2 479 aa17.17■□□□□ 0.34
SHKBP1-207ENST00000595631 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-207ENST00000595631 GMPSP49915 693 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-207ENST00000595631 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 CIAO1O76071 339 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 PDE8BO95263 885 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 UBE4AQ14139 1066 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 TNIP1Q15025 636 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 C15orf52Q6ZUT6 534 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 HACL1Q9UJ83 578 aa17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-207ENST00000595631 EPS15P42566 896 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 GYG1P46976 350 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 POLA2Q14181 598 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 MXD3Q9BW11 206 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 COA1Q9GZY4 146 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
SHKBP1-207ENST00000595631 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 FGFR2P21802 821 aa17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 EPHX2P34913 555 aa17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
SHKBP1-207ENST00000595631 IQCA1LA6NCM1 817 aa17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 FAM84BQ96KN1 310 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
SHKBP1-207ENST00000595631 USP17L3A6NCW0 530 aa17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 USP17L4A6NCW7 530 aa17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 TOMM70O94826 608 aa17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 TFCP2Q12800 502 aa17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 EAPPQ56P03 285 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 USP17L1Q7RTZ2 530 aa17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-207ENST00000595631 IL1R1P14778 569 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 GTF2IP78347 998 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 RSBN1LQ6PCB5 846 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 CRBNQ96SW2 442 aa17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-207ENST00000595631 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 SASH1O94885 1247 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 SLC5A1P13866 664 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 ADORA1P30542 326 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 BCAMP50895 628 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 LPIN2Q92539 896 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 ZNF609O15014 1411 aa17.09■□□□□ 0.33
SHKBP1-207ENST00000595631 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.33
SHKBP1-207ENST00000595631 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-207ENST00000595631 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.32
SHKBP1-207ENST00000595631 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.32
SHKBP1-207ENST00000595631 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-207ENST00000595631 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
SHKBP1-207ENST00000595631 GMLQ99445 158 aa17.08■□□□□ 0.32
SHKBP1-207ENST00000595631 COL1A1P02452 1464 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 EGFRP00533 1210 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 TIMM10P62072 90 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 CERS5Q8N5B7 392 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 DPF2Q92785 391 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-207ENST00000595631 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 TBC1D10BQ4KMP7 808 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms